RNA–Protein interactions for RNA: ENST00000265963.8

GTF2H1-201, Transcript of general transcription factor IIH subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-201ENST00000265963 NISCHQ9Y2I1 1504 aa17.09■□□□□ 0.33
GTF2H1-201ENST00000265963 SHROOM4Q9ULL8 1493 aa14.52□□□□□ -0.08
GTF2H1-201ENST00000265963 CCDC180Q9P1Z9 1646 aa14.52□□□□□ -0.09
GTF2H1-201ENST00000265963 ZCCHC6Q5VYS8 1495 aaKnown RBP14.49□□□□□ -0.09
GTF2H1-201ENST00000265963 SUPT5HO00267 1087 aaKnown RBP14.32□□□□□ -0.12
GTF2H1-201ENST00000265963 DCAF1Q9Y4B6 1507 aa14.09□□□□□ -0.15
GTF2H1-201ENST00000265963 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
GTF2H1-201ENST00000265963 CHIC1Q5VXU3 224 aa14.03□□□□□ -0.16
GTF2H1-201ENST00000265963 MYO15BQ96JP2 1530 aa13.96□□□□□ -0.18
GTF2H1-201ENST00000265963 HRCP23327 699 aa13.8□□□□□ -0.2
GTF2H1-201ENST00000265963 ABCC9O60706 1549 aa13.68□□□□□ -0.22
GTF2H1-201ENST00000265963 PCGF6Q9BYE7 350 aa13.67□□□□□ -0.22
GTF2H1-201ENST00000265963 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
GTF2H1-201ENST00000265963 RSF1Q96T23 1441 aaPredicted RBP13.55□□□□□ -0.24
GTF2H1-201ENST00000265963 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
GTF2H1-201ENST00000265963 TRIM26Q12899 539 aaPredicted RBP13.45□□□□□ -0.26
GTF2H1-201ENST00000265963 RB1CC1Q8TDY2 1594 aa13.45□□□□□ -0.26
GTF2H1-201ENST00000265963 NACADO15069 1562 aa13.4□□□□□ -0.27
GTF2H1-201ENST00000265963 PPARGC1BQ86YN6 1023 aaKnown RBP13.39□□□□□ -0.27
GTF2H1-201ENST00000265963 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
GTF2H1-201ENST00000265963 CECR2Q9BXF3 1484 aa13.27□□□□□ -0.29
GTF2H1-201ENST00000265963 ZEB1P37275 1124 aaPredicted RBP13.26□□□□□ -0.29
GTF2H1-201ENST00000265963 MROH2BQ7Z745 1585 aa13.25□□□□□ -0.29
GTF2H1-201ENST00000265963 FAM9AQ8IZU1 332 aaPredicted RBP13.2□□□□□ -0.3
GTF2H1-201ENST00000265963 WIZO95785 1651 aa13.18□□□□□ -0.3
GTF2H1-201ENST00000265963 BAZ1AQ9NRL2 1556 aaPredicted RBP13.16□□□□□ -0.3
GTF2H1-201ENST00000265963 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
GTF2H1-201ENST00000265963 TOP2AP11388 1531 aaKnown RBP13.02□□□□□ -0.32
GTF2H1-201ENST00000265963 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.32
GTF2H1-201ENST00000265963 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
GTF2H1-201ENST00000265963 CCDC88BA6NC98 1476 aa12.95□□□□□ -0.34
GTF2H1-201ENST00000265963 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
GTF2H1-201ENST00000265963 WRNQ14191 1432 aaPredicted RBP eCLIP12.91□□□□□ -0.34
GTF2H1-201ENST00000265963 ABCC8Q09428 1581 aa12.91□□□□□ -0.34
GTF2H1-201ENST00000265963 UNC13AQ9UPW8 1703 aa12.9□□□□□ -0.35
GTF2H1-201ENST00000265963 EEA1Q15075 1411 aa12.87□□□□□ -0.35
GTF2H1-201ENST00000265963 TNIKQ9UKE5 1360 aa12.85□□□□□ -0.35
GTF2H1-201ENST00000265963 CEP162Q5TB80 1403 aa12.84□□□□□ -0.35
GTF2H1-201ENST00000265963 CCER1Q8TC90 406 aaPredicted RBP12.83□□□□□ -0.36
GTF2H1-201ENST00000265963 SOGA1O94964 1423 aa12.82□□□□□ -0.36
GTF2H1-201ENST00000265963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
GTF2H1-201ENST00000265963 CSRNP3Q8WYN3 585 aa12.8□□□□□ -0.36
GTF2H1-201ENST00000265963 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.36
GTF2H1-201ENST00000265963 GOLGA3Q08378 1498 aa12.75□□□□□ -0.37
GTF2H1-201ENST00000265963 BICRAQ9NZM4 1560 aa12.74□□□□□ -0.37
GTF2H1-201ENST00000265963 RUSC2Q8N2Y8 1516 aa12.73□□□□□ -0.37
GTF2H1-201ENST00000265963 SCAF1Q9H7N4 1312 aaKnown RBP12.73□□□□□ -0.37
GTF2H1-201ENST00000265963 UBTFP17480 764 aaKnown RBP12.72□□□□□ -0.37
GTF2H1-201ENST00000265963 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
GTF2H1-201ENST00000265963 CEP164Q9UPV0 1460 aa12.67□□□□□ -0.38
GTF2H1-201ENST00000265963 PABPN1Q86U42 306 aaKnown RBP eCLIP12.67□□□□□ -0.38
GTF2H1-201ENST00000265963 KIF21BO75037 1637 aa12.66□□□□□ -0.38
GTF2H1-201ENST00000265963 TTBK1Q5TCY1 1321 aaPredicted RBP12.65□□□□□ -0.38
GTF2H1-201ENST00000265963 DIEXFQ68CQ4 756 aaKnown RBP12.65□□□□□ -0.38
GTF2H1-201ENST00000265963 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
GTF2H1-201ENST00000265963 ATAD2BQ9ULI0 1458 aa12.63□□□□□ -0.39
GTF2H1-201ENST00000265963 ACIN1Q9UKV3 1341 aaKnown RBP12.62□□□□□ -0.39
GTF2H1-201ENST00000265963 BAZ1BQ9UIG0 1483 aaKnown RBP12.6□□□□□ -0.39
GTF2H1-201ENST00000265963 CLIP1P30622 1438 aa12.59□□□□□ -0.39
GTF2H1-201ENST00000265963 CENPBP07199 599 aaPredicted RBP12.57□□□□□ -0.4
GTF2H1-201ENST00000265963 VPS8Q8N3P4 1428 aa12.56□□□□□ -0.4
GTF2H1-201ENST00000265963 NEUROD1Q13562 356 aa12.55□□□□□ -0.4
GTF2H1-201ENST00000265963 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
GTF2H1-201ENST00000265963 TOP2BQ02880 1626 aa12.52□□□□□ -0.41
GTF2H1-201ENST00000265963 RAPGEF2Q9Y4G8 1499 aa12.51□□□□□ -0.41
GTF2H1-201ENST00000265963 APLP2Q06481 763 aa12.5□□□□□ -0.41
GTF2H1-201ENST00000265963 BIVM-ERCC5R4GMW8 1640 aa12.47□□□□□ -0.41
GTF2H1-201ENST00000265963 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
GTF2H1-201ENST00000265963 ERICH3Q5RHP9 1530 aa12.46□□□□□ -0.42
GTF2H1-201ENST00000265963 GTF3C3Q9Y5Q9 886 aa12.45□□□□□ -0.42
GTF2H1-201ENST00000265963 PRXQ9BXM0 1461 aa12.42□□□□□ -0.42
GTF2H1-201ENST00000265963 HMGXB3Q12766 1538 aa12.4□□□□□ -0.42
GTF2H1-201ENST00000265963 CLSPNQ9HAW4 1339 aa12.39□□□□□ -0.43
GTF2H1-201ENST00000265963 NCAPD3P42695 1498 aa12.39□□□□□ -0.43
GTF2H1-201ENST00000265963 ARAP1Q96P48 1450 aa12.36□□□□□ -0.43
GTF2H1-201ENST00000265963 RANGAP1P46060 587 aaPredicted RBP12.35□□□□□ -0.43
GTF2H1-201ENST00000265963 KIF27Q86VH2 1401 aa12.34□□□□□ -0.43
GTF2H1-201ENST00000265963 CUX1P39880 1505 aa12.34□□□□□ -0.43
GTF2H1-201ENST00000265963 MIER1Q8N108 512 aa12.33□□□□□ -0.43
GTF2H1-201ENST00000265963 CFTRP13569 1480 aa12.31□□□□□ -0.44
GTF2H1-201ENST00000265963 DHX57Q6P158 1386 aaKnown RBP12.3□□□□□ -0.44
GTF2H1-201ENST00000265963 RRBP1Q9P2E9 1410 aaKnown RBP12.3□□□□□ -0.44
GTF2H1-201ENST00000265963 YTHDC1Q96MU7 727 aaKnown RBP12.29□□□□□ -0.44
GTF2H1-201ENST00000265963 KANK4Q5T7N3 995 aaPredicted RBP12.28□□□□□ -0.44
GTF2H1-201ENST00000265963 CUX2O14529 1486 aa12.26□□□□□ -0.45
GTF2H1-201ENST00000265963 ARHGAP35Q9NRY4 1499 aa12.24□□□□□ -0.45
GTF2H1-201ENST00000265963 CCNB3Q8WWL7 1395 aa12.22□□□□□ -0.45
GTF2H1-201ENST00000265963 PRDM2Q13029 1718 aa12.22□□□□□ -0.45
GTF2H1-201ENST00000265963 MAP3K1Q13233 1512 aa12.2□□□□□ -0.46
GTF2H1-201ENST00000265963 IGF1RP08069 1367 aa12.18□□□□□ -0.46
GTF2H1-201ENST00000265963 TIAM1Q13009 1591 aa12.15□□□□□ -0.47
GTF2H1-201ENST00000265963 CADPSQ9ULU8 1353 aa12.14□□□□□ -0.47
GTF2H1-201ENST00000265963 CARMIL1Q5VZK9 1371 aa12.13□□□□□ -0.47
GTF2H1-201ENST00000265963 MYT1Q01538 1121 aa12.13□□□□□ -0.47
GTF2H1-201ENST00000265963 RAB3GAP2Q9H2M9 1393 aa12.1□□□□□ -0.47
GTF2H1-201ENST00000265963 FGD5Q6ZNL6 1462 aa12.1□□□□□ -0.47
GTF2H1-201ENST00000265963 LRRC9Q6ZRR7 1453 aa12.1□□□□□ -0.47
GTF2H1-201ENST00000265963 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
GTF2H1-201ENST00000265963 SETD5Q9C0A6 1442 aa12.08□□□□□ -0.48
GTF2H1-201ENST00000265963 ITGAEP38570 1179 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms