Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL22A1Q8NFW1 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL22A1Q8NFW1 AC005034.3-201ENST00000604845 1747 ntBASIC7.5□□□□□ -1.21
COL22A1Q8NFW1 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL22A1Q8NFW1 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL22A1Q8NFW1 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
COL22A1Q8NFW1 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL22A1Q8NFW1 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL22A1Q8NFW1 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL22A1Q8NFW1 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 SNORA51.8-201ENST00000384234 132 ntBASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 MIR551A-201ENST00000385042 96 ntBASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 RPS4XP9-201ENST00000405151 780 ntBASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 PPP2R2DP1-201ENST00000420526 637 ntBASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 AC139697.1-201ENST00000548429 745 ntBASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 AC090607.5-201ENST00000615692 224 ntBASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 AC112694.2-201ENST00000623697 768 ntBASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 AC073869.10-201ENST00000642016 354 ntBASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 AL133482.1-201ENST00000415988 498 ntBASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 C4BPAP2-201ENST00000428434 478 ntBASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 RPS3AP38-201ENST00000435889 763 ntBASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL22A1Q8NFW1 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 RN7SKP95-201ENST00000362860 303 ntBASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 AC068538.1-201ENST00000376856 336 ntBASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 AL672138.1-201ENST00000450604 1015 ntBASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 RNU1-88P-201ENST00000459274 128 ntBASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 RN7SL385P-201ENST00000468873 276 ntBASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 AL049779.3-201ENST00000557141 606 ntBASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 AC083809.1-201ENST00000615051 472 ntBASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.48□□□□□ -1.21
COL22A1Q8NFW1 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.47□□□□□ -1.21
COL22A1Q8NFW1 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL22A1Q8NFW1 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL22A1Q8NFW1 AC127070.3-201ENST00000503695 3263 ntBASIC7.47□□□□□ -1.21
COL22A1Q8NFW1 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL22A1Q8NFW1 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
COL22A1Q8NFW1 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms