RNA–Protein interactions for RNA: ENST00000495228.1

DUBR-205, DPPA2 upstream binding RNA, humanhuman

TSL 2 BASIC

Gene DUBR, Length 411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-205ENST00000495228 AEBP2Q6ZN18 517 aaPredicted RBP21.25■□□□□ 0.99
DUBR-205ENST00000495228 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
DUBR-205ENST00000495228 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
DUBR-205ENST00000495228 PHF23Q9BUL5 403 aaPredicted RBP17.85■□□□□ 0.45
DUBR-205ENST00000495228 FOXD1Q16676 465 aa16.98■□□□□ 0.31
DUBR-205ENST00000495228 POTEDQ86YR6 584 aa16.32■□□□□ 0.2
DUBR-205ENST00000495228 MSH5O43196 834 aa15.99■□□□□ 0.15
DUBR-205ENST00000495228 PIAS4Q8N2W9 510 aaPredicted RBP15.74■□□□□ 0.11
DUBR-205ENST00000495228 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
DUBR-205ENST00000495228 PLPPR3Q6T4P5 718 aa15.57■□□□□ 0.08
DUBR-205ENST00000495228 ADRA2BP18089 450 aa15.5■□□□□ 0.07
DUBR-205ENST00000495228 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
DUBR-205ENST00000495228 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.12
DUBR-205ENST00000495228 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
DUBR-205ENST00000495228 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
DUBR-205ENST00000495228 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
DUBR-205ENST00000495228 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
DUBR-205ENST00000495228 RNF39Q9H2S5 420 aa13.64□□□□□ -0.23
DUBR-205ENST00000495228 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
DUBR-205ENST00000495228 CNKSR2Q8WXI2 1034 aa13.44□□□□□ -0.26
DUBR-205ENST00000495228 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
DUBR-205ENST00000495228 C1QBPQ07021 282 aaKnown RBP13.39□□□□□ -0.27
DUBR-205ENST00000495228 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
DUBR-205ENST00000495228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.97□□□□□ -0.33
DUBR-205ENST00000495228 NCBP3Q53F19 620 aaKnown RBP12.93□□□□□ -0.34
DUBR-205ENST00000495228 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
DUBR-205ENST00000495228 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
DUBR-205ENST00000495228 POTEHQ6S545 545 aa12.69□□□□□ -0.38
DUBR-205ENST00000495228 DSG3P32926 999 aa12.64□□□□□ -0.39
DUBR-205ENST00000495228 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
DUBR-205ENST00000495228 NISCHQ9Y2I1 1504 aa12.6□□□□□ -0.39
DUBR-205ENST00000495228 CAPN15O75808 1086 aa12.59□□□□□ -0.39
DUBR-205ENST00000495228 SLC4A2P04920 1241 aa12.35□□□□□ -0.43
DUBR-205ENST00000495228 ABCB7O75027 752 aa12.3□□□□□ -0.44
DUBR-205ENST00000495228 TRHP20396 242 aaPredicted RBP12.3□□□□□ -0.44
DUBR-205ENST00000495228 ZNF219Q9P2Y4 722 aaPredicted RBP12.25□□□□□ -0.45
DUBR-205ENST00000495228 KCNA4P22459 653 aa12.22□□□□□ -0.45
DUBR-205ENST00000495228 APLP2Q06481 763 aa12.21□□□□□ -0.45
DUBR-205ENST00000495228 SLC24A1O60721 1099 aa12.18□□□□□ -0.46
DUBR-205ENST00000495228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.12□□□□□ -0.47
DUBR-205ENST00000495228 HNRNPUL2Q1KMD3 747 aaKnown RBP12.12□□□□□ -0.47
DUBR-205ENST00000495228 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
DUBR-205ENST00000495228 RBM42Q9BTD8 480 aaKnown RBP12.02□□□□□ -0.49
DUBR-205ENST00000495228 CHRDL2Q6WN34 429 aa11.95□□□□□ -0.5
DUBR-205ENST00000495228 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
DUBR-205ENST00000495228 POLA2Q14181 598 aa11.88□□□□□ -0.51
DUBR-205ENST00000495228 MYCNP04198 464 aaPredicted RBP11.82□□□□□ -0.52
DUBR-205ENST00000495228 SP7Q8TDD2 431 aaPredicted RBP11.71□□□□□ -0.53
DUBR-205ENST00000495228 AKT1S1Q96B36 256 aa11.68□□□□□ -0.54
DUBR-205ENST00000495228 ATF5Q9Y2D1 282 aaPredicted RBP11.64□□□□□ -0.55
DUBR-205ENST00000495228 REM2Q8IYK8 340 aaPredicted RBP11.6□□□□□ -0.55
DUBR-205ENST00000495228 PIP4P2Q8N4L2 257 aa11.6□□□□□ -0.55
DUBR-205ENST00000495228 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
DUBR-205ENST00000495228 OSCARQ8IYS5 282 aa11.55□□□□□ -0.56
DUBR-205ENST00000495228 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
DUBR-205ENST00000495228 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
DUBR-205ENST00000495228 HAX1O00165 279 aa11.47□□□□□ -0.57
DUBR-205ENST00000495228 FXR2P51116 673 aaKnown RBP eCLIP11.46□□□□□ -0.57
DUBR-205ENST00000495228 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
DUBR-205ENST00000495228 EVX2Q03828 476 aa11.35□□□□□ -0.59
DUBR-205ENST00000495228 CCDC180Q9P1Z9 1646 aa11.33□□□□□ -0.6
DUBR-205ENST00000495228 ABCC9O60706 1549 aa11.27□□□□□ -0.61
DUBR-205ENST00000495228 AMER1Q5JTC6 1135 aaPredicted RBP11.27□□□□□ -0.61
DUBR-205ENST00000495228 ZBTB22O15209 634 aa11.26□□□□□ -0.61
DUBR-205ENST00000495228 CSRNP3Q8WYN3 585 aa11.26□□□□□ -0.61
DUBR-205ENST00000495228 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
DUBR-205ENST00000495228 SPDYE2BA6NHP3 402 aa11.22□□□□□ -0.61
DUBR-205ENST00000495228 SPDYE6P0CI01 402 aa11.22□□□□□ -0.61
DUBR-205ENST00000495228 SPDYE2Q495Y8 402 aa11.22□□□□□ -0.61
DUBR-205ENST00000495228 ATXN8OSP0DMR3 200 aa11.16□□□□□ -0.62
DUBR-205ENST00000495228 PRKAR2AP13861 404 aaKnown RBP11.16□□□□□ -0.62
DUBR-205ENST00000495228 FBLN2P98095 1184 aa11.13□□□□□ -0.63
DUBR-205ENST00000495228 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
DUBR-205ENST00000495228 SPDYE1Q8NFV5 336 aaPredicted RBP11.11□□□□□ -0.63
DUBR-205ENST00000495228 CLEC11AQ9Y240 323 aa11.11□□□□□ -0.63
DUBR-205ENST00000495228 MKRN4PQ13434 485 aaPredicted RBP11.08□□□□□ -0.64
DUBR-205ENST00000495228 SSUH2Q9Y2M2 353 aa11.05□□□□□ -0.64
DUBR-205ENST00000495228 GABBR2O75899 941 aa11.04□□□□□ -0.64
DUBR-205ENST00000495228 ZNF692Q9BU19 519 aaPredicted RBP11.01□□□□□ -0.65
DUBR-205ENST00000495228 LHX8Q68G74 356 aa10.98□□□□□ -0.65
DUBR-205ENST00000495228 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
DUBR-205ENST00000495228 PRR29P0C7W0 189 aa10.87□□□□□ -0.67
DUBR-205ENST00000495228 PABPN1Q86U42 306 aaKnown RBP eCLIP10.85□□□□□ -0.67
DUBR-205ENST00000495228 POTEIP0CG38 1075 aa10.84□□□□□ -0.67
DUBR-205ENST00000495228 CD44P16070 742 aaKnown RBP10.79□□□□□ -0.68
DUBR-205ENST00000495228 RB1CC1Q8TDY2 1594 aa10.77□□□□□ -0.68
DUBR-205ENST00000495228 FARP1Q9Y4F1 1045 aaPredicted RBP10.76□□□□□ -0.69
DUBR-205ENST00000495228 DAXXQ9UER7 740 aaPredicted RBP10.75□□□□□ -0.69
DUBR-205ENST00000495228 NACADO15069 1562 aa10.72□□□□□ -0.69
DUBR-205ENST00000495228 CLCN6P51797 869 aa10.67□□□□□ -0.7
DUBR-205ENST00000495228 DCAF8L2P0C7V8 631 aa10.64□□□□□ -0.71
DUBR-205ENST00000495228 ZNF579Q8NAF0 562 aaKnown RBP10.62□□□□□ -0.71
DUBR-205ENST00000495228 DCBLD2Q96PD2 775 aa10.62□□□□□ -0.71
DUBR-205ENST00000495228 PLSCR2Q9NRY7 297 aa10.59□□□□□ -0.71
DUBR-205ENST00000495228 MYO15BQ96JP2 1530 aa10.58□□□□□ -0.72
DUBR-205ENST00000495228 ZRANB1Q9UGI0 708 aa10.57□□□□□ -0.72
DUBR-205ENST00000495228 UNC13AQ9UPW8 1703 aa10.55□□□□□ -0.72
DUBR-205ENST00000495228 CREBZFQ9NS37 354 aa10.55□□□□□ -0.72
DUBR-205ENST00000495228 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.73
DUBR-205ENST00000495228 OTUD5Q96G74 571 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms