RNA–Protein interactions for RNA: ENST00000361320.4

LRRTM3-201, Transcript of leucine rich repeat transmembrane neuronal 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM3, Length 4,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3-201ENST00000361320 NISCHQ9Y2I1 1504 aa13.54□□□□□ -0.24
LRRTM3-201ENST00000361320 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.26
LRRTM3-201ENST00000361320 SHROOM4Q9ULL8 1493 aa12.38□□□□□ -0.43
LRRTM3-201ENST00000361320 SUPT5HO00267 1087 aaKnown RBP12.26□□□□□ -0.45
LRRTM3-201ENST00000361320 ABCC9O60706 1549 aa12□□□□□ -0.49
LRRTM3-201ENST00000361320 PABPN1Q86U42 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
LRRTM3-201ENST00000361320 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
LRRTM3-201ENST00000361320 FAM9AQ8IZU1 332 aaPredicted RBP11.53□□□□□ -0.56
LRRTM3-201ENST00000361320 RANGAP1P46060 587 aaPredicted RBP11.39□□□□□ -0.59
LRRTM3-201ENST00000361320 TRIM41Q8WV44 630 aa11.38□□□□□ -0.59
LRRTM3-201ENST00000361320 CCDC180Q9P1Z9 1646 aa11.31□□□□□ -0.6
LRRTM3-201ENST00000361320 APLP2Q06481 763 aa11.29□□□□□ -0.6
LRRTM3-201ENST00000361320 ATP1B4Q9UN42 357 aaPredicted RBP11.25□□□□□ -0.61
LRRTM3-201ENST00000361320 UBTFP17480 764 aaKnown RBP11.21□□□□□ -0.61
LRRTM3-201ENST00000361320 SCRIBQ14160 1630 aa11.21□□□□□ -0.61
LRRTM3-201ENST00000361320 TTBK1Q5TCY1 1321 aaPredicted RBP11.2□□□□□ -0.62
LRRTM3-201ENST00000361320 ZCCHC6Q5VYS8 1495 aaKnown RBP11.17□□□□□ -0.62
LRRTM3-201ENST00000361320 RB1CC1Q8TDY2 1594 aa11.14□□□□□ -0.63
LRRTM3-201ENST00000361320 FBLN2P98095 1184 aa11.03□□□□□ -0.64
LRRTM3-201ENST00000361320 NACADO15069 1562 aa11.02□□□□□ -0.65
LRRTM3-201ENST00000361320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.02□□□□□ -0.65
LRRTM3-201ENST00000361320 HNRNPUL2Q1KMD3 747 aaKnown RBP11.02□□□□□ -0.65
LRRTM3-201ENST00000361320 CHIC1Q5VXU3 224 aa10.91□□□□□ -0.66
LRRTM3-201ENST00000361320 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
LRRTM3-201ENST00000361320 PPARGC1BQ86YN6 1023 aaKnown RBP10.86□□□□□ -0.67
LRRTM3-201ENST00000361320 LOC105371045A0A1W2PR82 267 aa10.83□□□□□ -0.68
LRRTM3-201ENST00000361320 PCGF6Q9BYE7 350 aa10.75□□□□□ -0.69
LRRTM3-201ENST00000361320 ITGAEP38570 1179 aa10.74□□□□□ -0.69
LRRTM3-201ENST00000361320 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
LRRTM3-201ENST00000361320 BAZ1BQ9UIG0 1483 aaKnown RBP10.72□□□□□ -0.69
LRRTM3-201ENST00000361320 ARID3CA6NKF2 412 aa10.7□□□□□ -0.7
LRRTM3-201ENST00000361320 P3H3Q8IVL6 736 aa10.7□□□□□ -0.7
LRRTM3-201ENST00000361320 CECR2Q9BXF3 1484 aa10.7□□□□□ -0.7
LRRTM3-201ENST00000361320 RSF1Q96T23 1441 aaPredicted RBP10.69□□□□□ -0.7
LRRTM3-201ENST00000361320 ERCC6Q03468 1493 aa10.68□□□□□ -0.7
LRRTM3-201ENST00000361320 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
LRRTM3-201ENST00000361320 CHMP7Q8WUX9 453 aaPredicted RBP10.65□□□□□ -0.71
LRRTM3-201ENST00000361320 BAZ1AQ9NRL2 1556 aaPredicted RBP10.61□□□□□ -0.71
LRRTM3-201ENST00000361320 CCER1Q8TC90 406 aaPredicted RBP10.59□□□□□ -0.71
LRRTM3-201ENST00000361320 NPM1P06748 294 aaKnown RBP eCLIP10.58□□□□□ -0.72
LRRTM3-201ENST00000361320 MYO15BQ96JP2 1530 aa10.57□□□□□ -0.72
LRRTM3-201ENST00000361320 FAM50AQ14320 339 aaKnown RBP10.54□□□□□ -0.72
LRRTM3-201ENST00000361320 MROH2BQ7Z745 1585 aa10.51□□□□□ -0.73
LRRTM3-201ENST00000361320 ZNF777Q9ULD5 760 aaPredicted RBP10.48□□□□□ -0.73
LRRTM3-201ENST00000361320 SMARCA2P51531 1590 aa10.47□□□□□ -0.73
LRRTM3-201ENST00000361320 CDK11AQ9UQ88 783 aaPredicted RBP10.46□□□□□ -0.74
LRRTM3-201ENST00000361320 PDS5BQ9NTI5 1447 aa10.45□□□□□ -0.74
LRRTM3-201ENST00000361320 WRNQ14191 1432 aaPredicted RBP eCLIP10.45□□□□□ -0.74
LRRTM3-201ENST00000361320 ATAD2BQ9ULI0 1458 aa10.41□□□□□ -0.74
LRRTM3-201ENST00000361320 TRIM52Q96A61 297 aa10.41□□□□□ -0.74
LRRTM3-201ENST00000361320 TRIM26Q12899 539 aaPredicted RBP10.4□□□□□ -0.74
LRRTM3-201ENST00000361320 PLPPR3Q6T4P5 718 aa10.4□□□□□ -0.74
LRRTM3-201ENST00000361320 CADPSQ9ULU8 1353 aa10.39□□□□□ -0.75
LRRTM3-201ENST00000361320 DNAJC5BQ9UF47 199 aa10.38□□□□□ -0.75
LRRTM3-201ENST00000361320 KCNH8Q96L42 1107 aa10.38□□□□□ -0.75
LRRTM3-201ENST00000361320 CCDC88BA6NC98 1476 aa10.37□□□□□ -0.75
LRRTM3-201ENST00000361320 ESF1Q9H501 851 aaKnown RBP10.35□□□□□ -0.75
LRRTM3-201ENST00000361320 POLR3GLQ9BT43 218 aa10.35□□□□□ -0.75
LRRTM3-201ENST00000361320 KIF27Q86VH2 1401 aa10.35□□□□□ -0.75
LRRTM3-201ENST00000361320 TDRD9Q8NDG6 1382 aaKnown RBP10.34□□□□□ -0.75
LRRTM3-201ENST00000361320 TRHP20396 242 aaPredicted RBP10.34□□□□□ -0.75
LRRTM3-201ENST00000361320 WIZO95785 1651 aa10.32□□□□□ -0.76
LRRTM3-201ENST00000361320 EIF4G1Q04637 1599 aaKnown RBP10.31□□□□□ -0.76
LRRTM3-201ENST00000361320 CUX2O14529 1486 aa10.3□□□□□ -0.76
LRRTM3-201ENST00000361320 SMARCA4P51532 1647 aa10.3□□□□□ -0.76
LRRTM3-201ENST00000361320 SOGA1O94964 1423 aa10.29□□□□□ -0.76
LRRTM3-201ENST00000361320 BCANQ96GW7 911 aa10.29□□□□□ -0.76
LRRTM3-201ENST00000361320 ZEB1P37275 1124 aaPredicted RBP10.28□□□□□ -0.76
LRRTM3-201ENST00000361320 PLEKHD1A6NEE1 506 aa10.27□□□□□ -0.77
LRRTM3-201ENST00000361320 SLC4A1APQ9BWU0 796 aaKnown RBP10.26□□□□□ -0.77
LRRTM3-201ENST00000361320 CEP164Q9UPV0 1460 aa10.26□□□□□ -0.77
LRRTM3-201ENST00000361320 CNGB1Q14028 1251 aaPredicted RBP10.26□□□□□ -0.77
LRRTM3-201ENST00000361320 TOP2AP11388 1531 aaKnown RBP10.25□□□□□ -0.77
LRRTM3-201ENST00000361320 ZNF326Q5BKZ1 582 aaKnown RBP10.24□□□□□ -0.77
LRRTM3-201ENST00000361320 MTUS2Q5JR59 1369 aa10.24□□□□□ -0.77
LRRTM3-201ENST00000361320 CARMIL1Q5VZK9 1371 aa10.24□□□□□ -0.77
LRRTM3-201ENST00000361320 NEUROD1Q13562 356 aa10.24□□□□□ -0.77
LRRTM3-201ENST00000361320 NCAPD3P42695 1498 aa10.23□□□□□ -0.77
LRRTM3-201ENST00000361320 FANCD2Q9BXW9 1451 aa10.23□□□□□ -0.77
LRRTM3-201ENST00000361320 CHIC2Q9UKJ5 165 aa10.22□□□□□ -0.77
LRRTM3-201ENST00000361320 CLIP1P30622 1438 aa10.21□□□□□ -0.77
LRRTM3-201ENST00000361320 TSPY4P0CV99 314 aa10.21□□□□□ -0.78
LRRTM3-201ENST00000361320 TSPY10P0CW01 314 aa10.21□□□□□ -0.78
LRRTM3-201ENST00000361320 EEA1Q15075 1411 aa10.21□□□□□ -0.78
LRRTM3-201ENST00000361320 CHGAP10645 457 aaKnown RBP10.2□□□□□ -0.78
LRRTM3-201ENST00000361320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.2□□□□□ -0.78
LRRTM3-201ENST00000361320 STAG3Q9UJ98 1225 aa10.2□□□□□ -0.78
LRRTM3-201ENST00000361320 CC2D2AQ9P2K1 1620 aa10.2□□□□□ -0.78
LRRTM3-201ENST00000361320 ABCC8Q09428 1581 aa10.2□□□□□ -0.78
LRRTM3-201ENST00000361320 ARID4BQ4LE39 1312 aaPredicted RBP10.18□□□□□ -0.78
LRRTM3-201ENST00000361320 OSCARQ8IYS5 282 aa10.18□□□□□ -0.78
LRRTM3-201ENST00000361320 CYB5RLQ6IPT4 315 aa10.17□□□□□ -0.78
LRRTM3-201ENST00000361320 GOLGA3Q08378 1498 aa10.16□□□□□ -0.78
LRRTM3-201ENST00000361320 NESP48681 1621 aa10.15□□□□□ -0.79
LRRTM3-201ENST00000361320 CFDP1Q9UEE9 299 aaPredicted RBP10.12□□□□□ -0.79
LRRTM3-201ENST00000361320 BICRAQ9NZM4 1560 aa10.12□□□□□ -0.79
LRRTM3-201ENST00000361320 JPH4Q96JJ6 628 aa10.12□□□□□ -0.79
LRRTM3-201ENST00000361320 CARMIL2Q6F5E8 1435 aa10.1□□□□□ -0.79
LRRTM3-201ENST00000361320 CEP162Q5TB80 1403 aa10.09□□□□□ -0.79
LRRTM3-201ENST00000361320 SENP3Q9H4L4 574 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms