RNA–Protein interactions for RNA: ENST00000396356.7

SOX6-202, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SOX6, Length 8,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-202ENST00000396356 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
SOX6-202ENST00000396356 NISCHQ9Y2I1 1504 aa13.08□□□□□ -0.32
SOX6-202ENST00000396356 MYT1Q01538 1121 aa12.9□□□□□ -0.34
SOX6-202ENST00000396356 FAM9AQ8IZU1 332 aaPredicted RBP12.81□□□□□ -0.36
SOX6-202ENST00000396356 DCAF8L2P0C7V8 631 aa12.74□□□□□ -0.37
SOX6-202ENST00000396356 CCER1Q8TC90 406 aaPredicted RBP12.69□□□□□ -0.38
SOX6-202ENST00000396356 ZEB1P37275 1124 aaPredicted RBP12.6□□□□□ -0.39
SOX6-202ENST00000396356 APLP2Q06481 763 aa12.59□□□□□ -0.39
SOX6-202ENST00000396356 CENPBP07199 599 aaPredicted RBP12.43□□□□□ -0.42
SOX6-202ENST00000396356 YTHDC1Q96MU7 727 aaKnown RBP12.36□□□□□ -0.43
SOX6-202ENST00000396356 SUPT5HO00267 1087 aaKnown RBP12.26□□□□□ -0.45
SOX6-202ENST00000396356 ERICH6Q7L0X2 663 aa12.2□□□□□ -0.46
SOX6-202ENST00000396356 NEFLP07196 543 aa12.13□□□□□ -0.47
SOX6-202ENST00000396356 DAXXQ9UER7 740 aaPredicted RBP11.85□□□□□ -0.51
SOX6-202ENST00000396356 SHROOM4Q9ULL8 1493 aa11.81□□□□□ -0.52
SOX6-202ENST00000396356 TRIM41Q8WV44 630 aa11.8□□□□□ -0.52
SOX6-202ENST00000396356 TTBK1Q5TCY1 1321 aaPredicted RBP11.76□□□□□ -0.53
SOX6-202ENST00000396356 CLSPNQ9HAW4 1339 aa11.75□□□□□ -0.53
SOX6-202ENST00000396356 TRIM26Q12899 539 aaPredicted RBP11.67□□□□□ -0.54
SOX6-202ENST00000396356 PCGF6Q9BYE7 350 aa11.67□□□□□ -0.54
SOX6-202ENST00000396356 UBTFP17480 764 aaKnown RBP11.62□□□□□ -0.55
SOX6-202ENST00000396356 MYT1LQ9UL68 1186 aa11.59□□□□□ -0.55
SOX6-202ENST00000396356 ACIN1Q9UKV3 1341 aaKnown RBP11.58□□□□□ -0.56
SOX6-202ENST00000396356 RTL5Q5HYW3 569 aaPredicted RBP11.57□□□□□ -0.56
SOX6-202ENST00000396356 NEFMP07197 916 aa11.49□□□□□ -0.57
SOX6-202ENST00000396356 ZNF316A6NFI3 1004 aaPredicted RBP11.47□□□□□ -0.57
SOX6-202ENST00000396356 CCDC180Q9P1Z9 1646 aa11.4□□□□□ -0.58
SOX6-202ENST00000396356 HRCP23327 699 aa11.39□□□□□ -0.59
SOX6-202ENST00000396356 ATP1B4Q9UN42 357 aaPredicted RBP11.33□□□□□ -0.6
SOX6-202ENST00000396356 ZBTB47Q9UFB7 747 aaPredicted RBP11.32□□□□□ -0.6
SOX6-202ENST00000396356 EIF5BO60841 1220 aaKnown RBP11.3□□□□□ -0.6
SOX6-202ENST00000396356 GLIPR1L2Q4G1C9 344 aa11.27□□□□□ -0.6
SOX6-202ENST00000396356 EHMT2Q96KQ7 1210 aa11.25□□□□□ -0.61
SOX6-202ENST00000396356 ANP32BQ92688 251 aaKnown RBP11.24□□□□□ -0.61
SOX6-202ENST00000396356 CDK11AQ9UQ88 783 aaPredicted RBP11.19□□□□□ -0.62
SOX6-202ENST00000396356 ANP32EQ9BTT0 268 aa11.17□□□□□ -0.62
SOX6-202ENST00000396356 ANP32CO43423 234 aa11.17□□□□□ -0.62
SOX6-202ENST00000396356 DIEXFQ68CQ4 756 aaKnown RBP11.15□□□□□ -0.62
SOX6-202ENST00000396356 ANP32AP39687 249 aaKnown RBP11.14□□□□□ -0.63
SOX6-202ENST00000396356 UPF2Q9HAU5 1272 aaKnown RBP11.11□□□□□ -0.63
SOX6-202ENST00000396356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.11□□□□□ -0.63
SOX6-202ENST00000396356 HNRNPUL2Q1KMD3 747 aaKnown RBP11.11□□□□□ -0.63
SOX6-202ENST00000396356 DCAF1Q9Y4B6 1507 aa11.09□□□□□ -0.63
SOX6-202ENST00000396356 EEA1Q15075 1411 aa11.08□□□□□ -0.64
SOX6-202ENST00000396356 CHIC1Q5VXU3 224 aa11.06□□□□□ -0.64
SOX6-202ENST00000396356 RANGAP1P46060 587 aaPredicted RBP11.04□□□□□ -0.64
SOX6-202ENST00000396356 SLC24A1O60721 1099 aa11□□□□□ -0.65
SOX6-202ENST00000396356 CANXP27824 592 aaKnown RBP10.99□□□□□ -0.65
SOX6-202ENST00000396356 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.99□□□□□ -0.65
SOX6-202ENST00000396356 POLR3GLQ9BT43 218 aa10.91□□□□□ -0.66
SOX6-202ENST00000396356 ARID4BQ4LE39 1312 aaPredicted RBP10.91□□□□□ -0.66
SOX6-202ENST00000396356 NEUROD1Q13562 356 aa10.9□□□□□ -0.66
SOX6-202ENST00000396356 CHMP4BQ9H444 224 aaKnown RBP10.9□□□□□ -0.66
SOX6-202ENST00000396356 FAM50AQ14320 339 aaKnown RBP10.89□□□□□ -0.67
SOX6-202ENST00000396356 TONSLQ96HA7 1378 aa10.89□□□□□ -0.67
SOX6-202ENST00000396356 ZCCHC6Q5VYS8 1495 aaKnown RBP10.89□□□□□ -0.67
SOX6-202ENST00000396356 TRIM52Q96A61 297 aa10.88□□□□□ -0.67
SOX6-202ENST00000396356 SLC4A1APQ9BWU0 796 aaKnown RBP10.88□□□□□ -0.67
SOX6-202ENST00000396356 HSP90AA1P07900 732 aaKnown RBP10.88□□□□□ -0.67
SOX6-202ENST00000396356 CFAP44Q96MT7 982 aa10.87□□□□□ -0.67
SOX6-202ENST00000396356 DDRGK1Q96HY6 314 aa10.86□□□□□ -0.67
SOX6-202ENST00000396356 RSF1Q96T23 1441 aaPredicted RBP10.85□□□□□ -0.67
SOX6-202ENST00000396356 RB1CC1Q8TDY2 1594 aa10.85□□□□□ -0.67
SOX6-202ENST00000396356 ITGAEP38570 1179 aa10.85□□□□□ -0.67
SOX6-202ENST00000396356 TNNT2P45379 298 aaPredicted RBP10.84□□□□□ -0.67
SOX6-202ENST00000396356 BECN1Q14457 450 aa10.84□□□□□ -0.67
SOX6-202ENST00000396356 NACADO15069 1562 aa10.83□□□□□ -0.68
SOX6-202ENST00000396356 CDCA8Q53HL2 280 aa10.82□□□□□ -0.68
SOX6-202ENST00000396356 CDK11BP21127 795 aaKnown RBP10.82□□□□□ -0.68
SOX6-202ENST00000396356 GOLGA6L22H0YM25 854 aa10.82□□□□□ -0.68
SOX6-202ENST00000396356 MYH16Q9H6N6 1097 aa10.82□□□□□ -0.68
SOX6-202ENST00000396356 TRIM44Q96DX7 344 aaPredicted RBP10.82□□□□□ -0.68
SOX6-202ENST00000396356 CSRNP3Q8WYN3 585 aa10.78□□□□□ -0.68
SOX6-202ENST00000396356 ESF1Q9H501 851 aaKnown RBP10.78□□□□□ -0.68
SOX6-202ENST00000396356 NCLP19338 710 aaKnown RBP10.77□□□□□ -0.69
SOX6-202ENST00000396356 MS4A1P11836 297 aa10.76□□□□□ -0.69
SOX6-202ENST00000396356 NRDCO43847 1150 aa10.75□□□□□ -0.69
SOX6-202ENST00000396356 HAP1P54257 671 aaPredicted RBP10.74□□□□□ -0.69
SOX6-202ENST00000396356 PTMSP20962 102 aa10.74□□□□□ -0.69
SOX6-202ENST00000396356 L1TD1Q5T7N2 865 aaKnown RBP10.74□□□□□ -0.69
SOX6-202ENST00000396356 TIMELESSQ9UNS1 1208 aa10.73□□□□□ -0.69
SOX6-202ENST00000396356 CASC1Q6TDU7 716 aa10.72□□□□□ -0.69
SOX6-202ENST00000396356 GOLGA6L6A8MZA4 724 aa10.72□□□□□ -0.69
SOX6-202ENST00000396356 GTF3C3Q9Y5Q9 886 aa10.72□□□□□ -0.69
SOX6-202ENST00000396356 CHMP4AQ9BY43 222 aa10.72□□□□□ -0.69
SOX6-202ENST00000396356 ERICH6BQ5W0A0 696 aa10.7□□□□□ -0.7
SOX6-202ENST00000396356 GOLGA3Q08378 1498 aa10.69□□□□□ -0.7
SOX6-202ENST00000396356 USP35Q9P2H5 1018 aa10.69□□□□□ -0.7
SOX6-202ENST00000396356 FHAD1B1AJZ9 1412 aa10.68□□□□□ -0.7
SOX6-202ENST00000396356 PPM1GO15355 546 aaPredicted RBP10.67□□□□□ -0.7
SOX6-202ENST00000396356 PNNQ9H307 717 aaKnown RBP10.67□□□□□ -0.7
SOX6-202ENST00000396356 CEP162Q5TB80 1403 aa10.67□□□□□ -0.7
SOX6-202ENST00000396356 ZRSR1Q15695 479 aaKnown RBP10.65□□□□□ -0.7
SOX6-202ENST00000396356 WDR43Q15061 677 aaKnown RBP eCLIP10.65□□□□□ -0.7
SOX6-202ENST00000396356 NPM1P06748 294 aaKnown RBP eCLIP10.65□□□□□ -0.7
SOX6-202ENST00000396356 CEP164Q9UPV0 1460 aa10.65□□□□□ -0.7
SOX6-202ENST00000396356 SCRIBQ14160 1630 aa10.64□□□□□ -0.71
SOX6-202ENST00000396356 CCDC136Q96JN2 1154 aa10.63□□□□□ -0.71
SOX6-202ENST00000396356 ABCC9O60706 1549 aa10.63□□□□□ -0.71
SOX6-202ENST00000396356 CLIP1P30622 1438 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms