Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 AC025768.1-201ENST00000510057 267 ntBASIC6.33□□□□□ -1.4
USP29Q9HBJ7 SNX18P25-201ENST00000510539 758 ntBASIC6.33□□□□□ -1.4
USP29Q9HBJ7 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 AC134349.2-201ENST00000535136 910 ntBASIC6.33□□□□□ -1.4
USP29Q9HBJ7 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 BNIP3P27-201ENST00000599991 412 ntBASIC6.33□□□□□ -1.4
USP29Q9HBJ7 OR4H6P-202ENST00000603819 340 ntBASIC6.33□□□□□ -1.4
USP29Q9HBJ7 AC004890.3-201ENST00000605566 1095 ntBASIC6.33□□□□□ -1.4
USP29Q9HBJ7 AC242628.1-201ENST00000606810 391 ntBASIC6.33□□□□□ -1.4
USP29Q9HBJ7 AC022106.1-201ENST00000612834 766 ntBASIC6.33□□□□□ -1.4
USP29Q9HBJ7 AP001153.1-201ENST00000641024 338 ntBASIC6.33□□□□□ -1.4
USP29Q9HBJ7 WDR95P-201ENST00000425638 1542 ntBASIC6.33□□□□□ -1.4
USP29Q9HBJ7 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 AC011416.1-201ENST00000514947 1732 ntBASIC6.33□□□□□ -1.4
USP29Q9HBJ7 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
USP29Q9HBJ7 AC087516.1-201ENST00000561236 2428 ntBASIC6.33□□□□□ -1.4
USP29Q9HBJ7 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AP001002.1-201ENST00000625148 1513 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AL050305.1-201ENST00000399993 1230 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AL358178.1-201ENST00000407698 397 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 PTCD2P2-201ENST00000415579 1095 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AC013268.2-201ENST00000420753 337 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AC115283.1-201ENST00000427353 400 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 MTND4LP7-201ENST00000431728 294 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AL645936.1-201ENST00000441979 518 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 HIGD1AP16-201ENST00000450986 258 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 HMGN1P15-201ENST00000513870 295 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 ZNF519P4-201ENST00000514008 125 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 TRIM51DP-201ENST00000529746 596 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AC036111.2-201ENST00000533247 901 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AL138895.2-201ENST00000603019 178 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 RPAP2P1-201ENST00000603626 1168 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 AL049840.6-201ENST00000604583 345 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.32□□□□□ -1.4
USP29Q9HBJ7 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP29Q9HBJ7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AC024587.1-201ENST00000505925 2157 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AL355834.1-201ENST00000556602 3965 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 AL136520.1-201ENST00000600311 1322 ntBASIC6.31□□□□□ -1.4
USP29Q9HBJ7 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
USP29Q9HBJ7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms