RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, humanhuman

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-223ENST00000625891 AEBP2Q6ZN18 517 aaPredicted RBP34.32■■■■□ 3.08
NRXN1-223ENST00000625891 CHIC1Q5VXU3 224 aa32.5■■■□□ 2.79
NRXN1-223ENST00000625891 SENP3Q9H4L4 574 aaPredicted RBP29.27■■■□□ 2.28
NRXN1-223ENST00000625891 PHF23Q9BUL5 403 aaPredicted RBP28.9■■■□□ 2.22
NRXN1-223ENST00000625891 FOXD1Q16676 465 aa27.31■■□□□ 1.96
NRXN1-223ENST00000625891 PLPPR3Q6T4P5 718 aa25.92■■□□□ 1.74
NRXN1-223ENST00000625891 MSH5O43196 834 aa25.57■■□□□ 1.68
NRXN1-223ENST00000625891 PPP6R1Q9UPN7 881 aa25.49■■□□□ 1.67
NRXN1-223ENST00000625891 PIAS4Q8N2W9 510 aaPredicted RBP25.47■■□□□ 1.67
NRXN1-223ENST00000625891 ADRA2BP18089 450 aa25.38■■□□□ 1.65
NRXN1-223ENST00000625891 POTEDQ86YR6 584 aa25.11■■□□□ 1.61
NRXN1-223ENST00000625891 MAPK8IP2Q13387 824 aaPredicted RBP23.35■■□□□ 1.33
NRXN1-223ENST00000625891 DMRT2Q9Y5R5 561 aa23.21■■□□□ 1.31
NRXN1-223ENST00000625891 SCAF1Q9H7N4 1312 aaKnown RBP23.21■■□□□ 1.31
NRXN1-223ENST00000625891 PPP4R3CPQ6ZMV5 832 aa22.72■■□□□ 1.23
NRXN1-223ENST00000625891 HOXD11P31277 338 aaPredicted RBP22.33■■□□□ 1.17
NRXN1-223ENST00000625891 CNKSR2Q8WXI2 1034 aa22.31■■□□□ 1.16
NRXN1-223ENST00000625891 DCAF8L1A6NGE4 600 aa22.23■■□□□ 1.15
NRXN1-223ENST00000625891 RNF216Q9NWF9 866 aaPredicted RBP22.13■■□□□ 1.13
NRXN1-223ENST00000625891 CACNB1Q02641 598 aaPredicted RBP21.99■■□□□ 1.11
NRXN1-223ENST00000625891 RNF39Q9H2S5 420 aa21.82■■□□□ 1.08
NRXN1-223ENST00000625891 NCBP3Q53F19 620 aaKnown RBP21.81■■□□□ 1.08
NRXN1-223ENST00000625891 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
NRXN1-223ENST00000625891 NPM3O75607 178 aaKnown RBP21.51■■□□□ 1.03
NRXN1-223ENST00000625891 C1QBPQ07021 282 aaKnown RBP21.5■■□□□ 1.03
NRXN1-223ENST00000625891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.25■□□□□ 0.99
NRXN1-223ENST00000625891 KCNA4P22459 653 aa21.02■□□□□ 0.96
NRXN1-223ENST00000625891 U3KPZ7 1027 aaPredicted RBP20.81■□□□□ 0.92
NRXN1-223ENST00000625891 SLC4A2P04920 1241 aa20.58■□□□□ 0.89
NRXN1-223ENST00000625891 SPINK5Q9NQ38 1064 aaPredicted RBP20.54■□□□□ 0.88
NRXN1-223ENST00000625891 CAPN15O75808 1086 aa20.48■□□□□ 0.87
NRXN1-223ENST00000625891 DSG3P32926 999 aa20.41■□□□□ 0.86
NRXN1-223ENST00000625891 APLP2Q06481 763 aa20.2■□□□□ 0.82
NRXN1-223ENST00000625891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.17■□□□□ 0.82
NRXN1-223ENST00000625891 HNRNPUL2Q1KMD3 747 aaKnown RBP20.17■□□□□ 0.82
NRXN1-223ENST00000625891 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.81
NRXN1-223ENST00000625891 ZNF219Q9P2Y4 722 aaPredicted RBP20.1■□□□□ 0.81
NRXN1-223ENST00000625891 SAMD1Q6SPF0 538 aaPredicted RBP20.06■□□□□ 0.8
NRXN1-223ENST00000625891 ABCB7O75027 752 aa20■□□□□ 0.79
NRXN1-223ENST00000625891 MYCNP04198 464 aaPredicted RBP19.88■□□□□ 0.77
NRXN1-223ENST00000625891 SLC4A1APQ9BWU0 796 aaKnown RBP19.82■□□□□ 0.76
NRXN1-223ENST00000625891 POTEHQ6S545 545 aa19.66■□□□□ 0.74
NRXN1-223ENST00000625891 FOXD4L1Q9NU39 408 aa19.63■□□□□ 0.73
NRXN1-223ENST00000625891 POLA2Q14181 598 aa19.59■□□□□ 0.73
NRXN1-223ENST00000625891 RBM42Q9BTD8 480 aaKnown RBP19.46■□□□□ 0.71
NRXN1-223ENST00000625891 ATF5Q9Y2D1 282 aaPredicted RBP19.45■□□□□ 0.7
NRXN1-223ENST00000625891 ZBTB22O15209 634 aa19.33■□□□□ 0.68
NRXN1-223ENST00000625891 ZBTB12Q9Y330 459 aaPredicted RBP19.18■□□□□ 0.66
NRXN1-223ENST00000625891 CHRDL2Q6WN34 429 aa19.07■□□□□ 0.64
NRXN1-223ENST00000625891 ATXN8OSP0DMR3 200 aa19.05■□□□□ 0.64
NRXN1-223ENST00000625891 AKT1S1Q96B36 256 aa19.01■□□□□ 0.63
NRXN1-223ENST00000625891 OSCARQ8IYS5 282 aa18.96■□□□□ 0.63
NRXN1-223ENST00000625891 REM2Q8IYK8 340 aaPredicted RBP18.83■□□□□ 0.6
NRXN1-223ENST00000625891 FBLN2P98095 1184 aa18.67■□□□□ 0.58
NRXN1-223ENST00000625891 PITPNM1O00562 1244 aa18.63■□□□□ 0.57
NRXN1-223ENST00000625891 PIP4P2Q8N4L2 257 aa18.61■□□□□ 0.57
NRXN1-223ENST00000625891 SPDYE2BA6NHP3 402 aa18.58■□□□□ 0.56
NRXN1-223ENST00000625891 SPDYE6P0CI01 402 aa18.58■□□□□ 0.56
NRXN1-223ENST00000625891 SPDYE2Q495Y8 402 aa18.58■□□□□ 0.56
NRXN1-223ENST00000625891 MKRN4PQ13434 485 aaPredicted RBP18.56■□□□□ 0.56
NRXN1-223ENST00000625891 FXR2P51116 673 aaKnown RBP eCLIP18.5■□□□□ 0.55
NRXN1-223ENST00000625891 EHMT2Q96KQ7 1210 aa18.39■□□□□ 0.53
NRXN1-223ENST00000625891 SP7Q8TDD2 431 aaPredicted RBP18.38■□□□□ 0.53
NRXN1-223ENST00000625891 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
NRXN1-223ENST00000625891 ZNF692Q9BU19 519 aaPredicted RBP18.35■□□□□ 0.53
NRXN1-223ENST00000625891 SSUH2Q9Y2M2 353 aa18.34■□□□□ 0.53
NRXN1-223ENST00000625891 HAX1O00165 279 aa18.28■□□□□ 0.52
NRXN1-223ENST00000625891 SPDYE1Q8NFV5 336 aaPredicted RBP18.28■□□□□ 0.52
NRXN1-223ENST00000625891 CLEC11AQ9Y240 323 aa18.24■□□□□ 0.51
NRXN1-223ENST00000625891 PRKAR2AP13861 404 aaKnown RBP18.14■□□□□ 0.49
NRXN1-223ENST00000625891 EVX2Q03828 476 aa18.08■□□□□ 0.48
NRXN1-223ENST00000625891 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
NRXN1-223ENST00000625891 PRR29P0C7W0 189 aa17.94■□□□□ 0.46
NRXN1-223ENST00000625891 CHADLQ6NUI6 762 aa17.91■□□□□ 0.46
NRXN1-223ENST00000625891 C19orf67A6NJJ6 358 aa17.9■□□□□ 0.46
NRXN1-223ENST00000625891 GABBR2O75899 941 aa17.66■□□□□ 0.42
NRXN1-223ENST00000625891 FARP1Q9Y4F1 1045 aaPredicted RBP17.65■□□□□ 0.42
NRXN1-223ENST00000625891 SPDYE4A6NLX3 237 aa17.62■□□□□ 0.41
NRXN1-223ENST00000625891 STAG3Q9UJ98 1225 aa17.56■□□□□ 0.4
NRXN1-223ENST00000625891 CD44P16070 742 aaKnown RBP17.55■□□□□ 0.4
NRXN1-223ENST00000625891 CREBZFQ9NS37 354 aa17.49■□□□□ 0.39
NRXN1-223ENST00000625891 CLCN6P51797 869 aa17.34■□□□□ 0.37
NRXN1-223ENST00000625891 ZRANB1Q9UGI0 708 aa17.3■□□□□ 0.36
NRXN1-223ENST00000625891 POTEIP0CG38 1075 aa17.29■□□□□ 0.36
NRXN1-223ENST00000625891 ZNF579Q8NAF0 562 aaKnown RBP17.29■□□□□ 0.36
NRXN1-223ENST00000625891 LHX8Q68G74 356 aa17.25■□□□□ 0.35
NRXN1-223ENST00000625891 PROM2Q8N271 834 aa17.21■□□□□ 0.35
NRXN1-223ENST00000625891 MNX1P50219 401 aaPredicted RBP17.2■□□□□ 0.34
NRXN1-223ENST00000625891 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
NRXN1-223ENST00000625891 DCBLD2Q96PD2 775 aa17.14■□□□□ 0.33
NRXN1-223ENST00000625891 PAK3O75914 559 aaPredicted RBP17.11■□□□□ 0.33
NRXN1-223ENST00000625891 GALR2O43603 387 aaPredicted RBP17.09■□□□□ 0.33
NRXN1-223ENST00000625891 PHF12Q96QT6 1004 aa17.05■□□□□ 0.32
NRXN1-223ENST00000625891 TSPYL2Q9H2G4 693 aaPredicted RBP16.84■□□□□ 0.29
NRXN1-223ENST00000625891 MIER1Q8N108 512 aa16.82■□□□□ 0.28
NRXN1-223ENST00000625891 MS4A3Q96HJ5 214 aa16.82■□□□□ 0.28
NRXN1-223ENST00000625891 CCDC61Q9Y6R9 512 aa16.79■□□□□ 0.28
NRXN1-223ENST00000625891 PLEKHG5O94827 1062 aa16.78■□□□□ 0.28
NRXN1-223ENST00000625891 PELP1Q8IZL8 1130 aaKnown RBP16.78■□□□□ 0.28
NRXN1-223ENST00000625891 ASTLQ6HA08 431 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms