RNA–Protein interactions for RNA: ENST00000510539.2

SNX18P25-201, Transcript of sorting nexin 18 pseudogene 25, humanhuman

BASIC

Gene SNX18P25, Length 758 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18P25-201ENST00000510539 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
SNX18P25-201ENST00000510539 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
SNX18P25-201ENST00000510539 PHF23Q9BUL5 403 aaPredicted RBP19.92■□□□□ 0.78
SNX18P25-201ENST00000510539 SENP3Q9H4L4 574 aaPredicted RBP19.3■□□□□ 0.68
SNX18P25-201ENST00000510539 PLPPR3Q6T4P5 718 aa18.61■□□□□ 0.57
SNX18P25-201ENST00000510539 FOXD1Q16676 465 aa17.81■□□□□ 0.44
SNX18P25-201ENST00000510539 ADRA2BP18089 450 aa17.46■□□□□ 0.39
SNX18P25-201ENST00000510539 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
SNX18P25-201ENST00000510539 PIAS4Q8N2W9 510 aaPredicted RBP16.92■□□□□ 0.3
SNX18P25-201ENST00000510539 KCNA4P22459 653 aa16.49■□□□□ 0.23
SNX18P25-201ENST00000510539 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
SNX18P25-201ENST00000510539 MSH5O43196 834 aa16.32■□□□□ 0.2
SNX18P25-201ENST00000510539 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
SNX18P25-201ENST00000510539 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
SNX18P25-201ENST00000510539 CNKSR2Q8WXI2 1034 aa15.9■□□□□ 0.14
SNX18P25-201ENST00000510539 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
SNX18P25-201ENST00000510539 SLC4A1APQ9BWU0 796 aaKnown RBP15.81■□□□□ 0.12
SNX18P25-201ENST00000510539 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
SNX18P25-201ENST00000510539 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
SNX18P25-201ENST00000510539 NISCHQ9Y2I1 1504 aa15.62■□□□□ 0.09
SNX18P25-201ENST00000510539 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
SNX18P25-201ENST00000510539 DMRT2Q9Y5R5 561 aa15.45■□□□□ 0.06
SNX18P25-201ENST00000510539 CSRNP3Q8WYN3 585 aa15.43■□□□□ 0.06
SNX18P25-201ENST00000510539 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
SNX18P25-201ENST00000510539 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
SNX18P25-201ENST00000510539 ZBTB22O15209 634 aa15.15■□□□□ 0.02
SNX18P25-201ENST00000510539 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
SNX18P25-201ENST00000510539 SLC4A2P04920 1241 aa14.86□□□□□ -0.03
SNX18P25-201ENST00000510539 DCAF8L1A6NGE4 600 aa14.76□□□□□ -0.05
SNX18P25-201ENST00000510539 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
SNX18P25-201ENST00000510539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.59□□□□□ -0.07
SNX18P25-201ENST00000510539 ATXN8OSP0DMR3 200 aa14.56□□□□□ -0.08
SNX18P25-201ENST00000510539 ABCC9O60706 1549 aa14.53□□□□□ -0.08
SNX18P25-201ENST00000510539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.41□□□□□ -0.1
SNX18P25-201ENST00000510539 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
SNX18P25-201ENST00000510539 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
SNX18P25-201ENST00000510539 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
SNX18P25-201ENST00000510539 ATF5Q9Y2D1 282 aaPredicted RBP14.2□□□□□ -0.14
SNX18P25-201ENST00000510539 APLP2Q06481 763 aa14.18□□□□□ -0.14
SNX18P25-201ENST00000510539 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
SNX18P25-201ENST00000510539 POTEDQ86YR6 584 aa14.08□□□□□ -0.16
SNX18P25-201ENST00000510539 RNF39Q9H2S5 420 aa13.99□□□□□ -0.17
SNX18P25-201ENST00000510539 ZNF219Q9P2Y4 722 aaPredicted RBP13.98□□□□□ -0.17
SNX18P25-201ENST00000510539 FKBP8Q14318 412 aa13.94□□□□□ -0.18
SNX18P25-201ENST00000510539 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
SNX18P25-201ENST00000510539 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
SNX18P25-201ENST00000510539 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
SNX18P25-201ENST00000510539 CAPN15O75808 1086 aa13.79□□□□□ -0.2
SNX18P25-201ENST00000510539 POLA2Q14181 598 aa13.69□□□□□ -0.22
SNX18P25-201ENST00000510539 FBLN2P98095 1184 aa13.66□□□□□ -0.22
SNX18P25-201ENST00000510539 RB1CC1Q8TDY2 1594 aa13.65□□□□□ -0.22
SNX18P25-201ENST00000510539 MKRN4PQ13434 485 aaPredicted RBP13.61□□□□□ -0.23
SNX18P25-201ENST00000510539 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
SNX18P25-201ENST00000510539 SPDYE4A6NLX3 237 aa13.55□□□□□ -0.24
SNX18P25-201ENST00000510539 ABCB7O75027 752 aa13.53□□□□□ -0.24
SNX18P25-201ENST00000510539 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
SNX18P25-201ENST00000510539 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
SNX18P25-201ENST00000510539 NACADO15069 1562 aa13.45□□□□□ -0.26
SNX18P25-201ENST00000510539 DSG3P32926 999 aa13.45□□□□□ -0.26
SNX18P25-201ENST00000510539 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
SNX18P25-201ENST00000510539 DCAF8L2P0C7V8 631 aa13.39□□□□□ -0.27
SNX18P25-201ENST00000510539 RTN4Q9NQC3 1192 aaKnown RBP13.39□□□□□ -0.27
SNX18P25-201ENST00000510539 PROM2Q8N271 834 aa13.38□□□□□ -0.27
SNX18P25-201ENST00000510539 CACNB1Q02641 598 aaPredicted RBP13.33□□□□□ -0.28
SNX18P25-201ENST00000510539 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
SNX18P25-201ENST00000510539 BICRAQ9NZM4 1560 aa13.24□□□□□ -0.29
SNX18P25-201ENST00000510539 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
SNX18P25-201ENST00000510539 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
SNX18P25-201ENST00000510539 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
SNX18P25-201ENST00000510539 OSCARQ8IYS5 282 aa13.2□□□□□ -0.3
SNX18P25-201ENST00000510539 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
SNX18P25-201ENST00000510539 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
SNX18P25-201ENST00000510539 MYO15BQ96JP2 1530 aa13.14□□□□□ -0.31
SNX18P25-201ENST00000510539 CECR2Q9BXF3 1484 aa13.11□□□□□ -0.31
SNX18P25-201ENST00000510539 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
SNX18P25-201ENST00000510539 CC2D2AQ9P2K1 1620 aa13.07□□□□□ -0.32
SNX18P25-201ENST00000510539 SHROOM4Q9ULL8 1493 aa13.04□□□□□ -0.32
SNX18P25-201ENST00000510539 DNAJC5Q9H3Z4 198 aa13□□□□□ -0.33
SNX18P25-201ENST00000510539 STAG3Q9UJ98 1225 aa13□□□□□ -0.33
SNX18P25-201ENST00000510539 IFNLR1Q8IU57 520 aaPredicted RBP12.99□□□□□ -0.33
SNX18P25-201ENST00000510539 EIF4G1Q04637 1599 aaKnown RBP12.97□□□□□ -0.33
SNX18P25-201ENST00000510539 SCRIBQ14160 1630 aa12.91□□□□□ -0.34
SNX18P25-201ENST00000510539 ZCCHC6Q5VYS8 1495 aaKnown RBP12.88□□□□□ -0.35
SNX18P25-201ENST00000510539 RBM42Q9BTD8 480 aaKnown RBP12.86□□□□□ -0.35
SNX18P25-201ENST00000510539 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
SNX18P25-201ENST00000510539 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
SNX18P25-201ENST00000510539 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
SNX18P25-201ENST00000510539 SLC24A1O60721 1099 aa12.81□□□□□ -0.36
SNX18P25-201ENST00000510539 MIER1Q8N108 512 aa12.81□□□□□ -0.36
SNX18P25-201ENST00000510539 SPOCK2Q92563 424 aa12.8□□□□□ -0.36
SNX18P25-201ENST00000510539 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
SNX18P25-201ENST00000510539 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
SNX18P25-201ENST00000510539 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
SNX18P25-201ENST00000510539 PKD2Q13563 968 aa12.71□□□□□ -0.37
SNX18P25-201ENST00000510539 SPDYE1Q8NFV5 336 aaPredicted RBP12.71□□□□□ -0.37
SNX18P25-201ENST00000510539 CUX2O14529 1486 aa12.64□□□□□ -0.39
SNX18P25-201ENST00000510539 REM2Q8IYK8 340 aaPredicted RBP12.62□□□□□ -0.39
SNX18P25-201ENST00000510539 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
SNX18P25-201ENST00000510539 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
SNX18P25-201ENST00000510539 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms