Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC110056.1-201ENST00000525759 911 ntBASIC4.18□□□□□ -1.74
CKS2P33552 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.18□□□□□ -1.74
CKS2P33552 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS2P33552 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC4.18□□□□□ -1.74
CKS2P33552 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.18□□□□□ -1.74
CKS2P33552 Z95327.3-201ENST00000610385 572 ntBASIC4.18□□□□□ -1.74
CKS2P33552 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.18□□□□□ -1.74
CKS2P33552 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.18□□□□□ -1.74
CKS2P33552 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.18□□□□□ -1.74
CKS2P33552 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CKS2P33552 AC003985.2-201ENST00000562268 1669 ntBASIC4.18□□□□□ -1.74
CKS2P33552 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
CKS2P33552 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS2P33552 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS2P33552 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS2P33552 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CKS2P33552 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS2P33552 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.18□□□□□ -1.74
CKS2P33552 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CKS2P33552 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS2P33552 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CKS2P33552 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.18□□□□□ -1.74
CKS2P33552 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CKS2P33552 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CKS2P33552 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CKS2P33552 NEAT1-202ENST00000501122 22743 ntBASIC4.17□□□□□ -1.74
CKS2P33552 AC009220.2-201ENST00000489759 1751 ntBASIC4.17□□□□□ -1.74
CKS2P33552 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CKS2P33552 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CKS2P33552 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CKS2P33552 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CKS2P33552 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CKS2P33552 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CKS2P33552 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CKS2P33552 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CKS2P33552 SNORD94-201ENST00000386037 137 ntBASIC4.17□□□□□ -1.74
CKS2P33552 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CKS2P33552 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CKS2P33552 RPS4XP5-201ENST00000419038 768 ntBASIC4.17□□□□□ -1.74
CKS2P33552 PSMD10P2-201ENST00000432890 672 ntBASIC4.17□□□□□ -1.74
CKS2P33552 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.17□□□□□ -1.74
CKS2P33552 NDUFB4P8-201ENST00000435351 367 ntBASIC4.17□□□□□ -1.74
CKS2P33552 PCBP2P1-201ENST00000437262 977 ntBASIC4.17□□□□□ -1.74
CKS2P33552 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.17□□□□□ -1.74
CKS2P33552 AL645936.1-201ENST00000441979 518 ntBASIC4.17□□□□□ -1.74
CKS2P33552 SEPT14P12-201ENST00000442280 560 ntBASIC4.17□□□□□ -1.74
CKS2P33552 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.17□□□□□ -1.74
CKS2P33552 AL353803.3-201ENST00000444641 335 ntBASIC4.17□□□□□ -1.74
CKS2P33552 OR7E116P-201ENST00000448529 957 ntBASIC4.17□□□□□ -1.74
CKS2P33552 RPS26P24-201ENST00000497656 331 ntBASIC4.17□□□□□ -1.74
CKS2P33552 RPS17P5-201ENST00000498293 408 ntBASIC4.17□□□□□ -1.74
CKS2P33552 USP9YP2-201ENST00000504503 1000 ntBASIC4.17□□□□□ -1.74
CKS2P33552 USP9YP1-201ENST00000513521 1002 ntBASIC4.17□□□□□ -1.74
CKS2P33552 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.17□□□□□ -1.74
CKS2P33552 AC020937.1-201ENST00000519677 1013 ntBASIC4.17□□□□□ -1.74
CKS2P33552 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
CKS2P33552 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.17□□□□□ -1.74
CKS2P33552 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.17□□□□□ -1.74
CKS2P33552 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.17□□□□□ -1.74
CKS2P33552 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC4.17□□□□□ -1.74
CKS2P33552 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.17□□□□□ -1.74
CKS2P33552 TXNP4-201ENST00000575018 310 ntBASIC4.17□□□□□ -1.74
CKS2P33552 MIR378H-201ENST00000579966 83 ntBASIC4.17□□□□□ -1.74
CKS2P33552 AC127024.5-201ENST00000580085 462 ntBASIC4.17□□□□□ -1.74
CKS2P33552 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.17□□□□□ -1.74
CKS2P33552 AC026367.3-201ENST00000619032 590 ntBASIC4.17□□□□□ -1.74
CKS2P33552 AL138693.1-201ENST00000622219 129 ntBASIC4.17□□□□□ -1.74
CKS2P33552 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.17□□□□□ -1.74
CKS2P33552 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.17□□□□□ -1.74
CKS2P33552 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.17□□□□□ -1.74
CKS2P33552 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CKS2P33552 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CKS2P33552 MFSD8-219ENST00000641228 2559 ntBASIC4.17□□□□□ -1.74
CKS2P33552 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CKS2P33552 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.17□□□□□ -1.74
CKS2P33552 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.17□□□□□ -1.74
CKS2P33552 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.17□□□□□ -1.74
CKS2P33552 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CKS2P33552 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.17□□□□□ -1.74
CKS2P33552 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CKS2P33552 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CKS2P33552 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
CKS2P33552 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.17□□□□□ -1.74
CKS2P33552 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CKS2P33552 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CKS2P33552 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CKS2P33552 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CKS2P33552 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CKS2P33552 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.16□□□□□ -1.74
CKS2P33552 AC005261.2-201ENST00000593427 4258 ntBASIC4.16□□□□□ -1.74
CKS2P33552 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CKS2P33552 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.16□□□□□ -1.74
CKS2P33552 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CKS2P33552 AC015689.2-201ENST00000528172 1738 ntBASIC4.16□□□□□ -1.74
CKS2P33552 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.16□□□□□ -1.74
CKS2P33552 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CKS2P33552 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
CKS2P33552 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.16□□□□□ -1.74
CKS2P33552 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CKS2P33552 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms