RNA–Protein interactions for RNA: ENST00000561037.5

MIR9-3HG-211, Transcript of MIR9-3 host gene, humanhuman

TSL 5 BASIC

Gene MIR9-3HG, Length 779 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-211ENST00000561037 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
MIR9-3HG-211ENST00000561037 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
MIR9-3HG-211ENST00000561037 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
MIR9-3HG-211ENST00000561037 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
MIR9-3HG-211ENST00000561037 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
MIR9-3HG-211ENST00000561037 FOXD1Q16676 465 aa16.33■□□□□ 0.2
MIR9-3HG-211ENST00000561037 NISCHQ9Y2I1 1504 aa16.28■□□□□ 0.2
MIR9-3HG-211ENST00000561037 ADRA2BP18089 450 aa16.04■□□□□ 0.16
MIR9-3HG-211ENST00000561037 PPP6R1Q9UPN7 881 aa16.01■□□□□ 0.15
MIR9-3HG-211ENST00000561037 PIAS4Q8N2W9 510 aaPredicted RBP15.53■□□□□ 0.08
MIR9-3HG-211ENST00000561037 KCNA4P22459 653 aa15.18■□□□□ 0.02
MIR9-3HG-211ENST00000561037 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
MIR9-3HG-211ENST00000561037 MSH5O43196 834 aa14.99□□□□□ -0.01
MIR9-3HG-211ENST00000561037 NCBP3Q53F19 620 aaKnown RBP14.94□□□□□ -0.02
MIR9-3HG-211ENST00000561037 SCAF1Q9H7N4 1312 aaKnown RBP14.83□□□□□ -0.04
MIR9-3HG-211ENST00000561037 CNKSR2Q8WXI2 1034 aa14.64□□□□□ -0.07
MIR9-3HG-211ENST00000561037 POTEDQ86YR6 584 aa14.62□□□□□ -0.07
MIR9-3HG-211ENST00000561037 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
MIR9-3HG-211ENST00000561037 ABCC9O60706 1549 aa14.6□□□□□ -0.07
MIR9-3HG-211ENST00000561037 EHMT2Q96KQ7 1210 aa14.59□□□□□ -0.07
MIR9-3HG-211ENST00000561037 SLC4A1APQ9BWU0 796 aaKnown RBP14.59□□□□□ -0.07
MIR9-3HG-211ENST00000561037 CCDC180Q9P1Z9 1646 aa14.58□□□□□ -0.08
MIR9-3HG-211ENST00000561037 MAPK8IP2Q13387 824 aaPredicted RBP14.41□□□□□ -0.1
MIR9-3HG-211ENST00000561037 RNF216Q9NWF9 866 aaPredicted RBP14.25□□□□□ -0.13
MIR9-3HG-211ENST00000561037 CSRNP3Q8WYN3 585 aa14.24□□□□□ -0.13
MIR9-3HG-211ENST00000561037 DMRT2Q9Y5R5 561 aa14.19□□□□□ -0.14
MIR9-3HG-211ENST00000561037 DNAJC5BQ9UF47 199 aa14.18□□□□□ -0.14
MIR9-3HG-211ENST00000561037 HOXD11P31277 338 aaPredicted RBP14.06□□□□□ -0.16
MIR9-3HG-211ENST00000561037 ZBTB22O15209 634 aa13.92□□□□□ -0.18
MIR9-3HG-211ENST00000561037 DCAF8L2P0C7V8 631 aa13.91□□□□□ -0.18
MIR9-3HG-211ENST00000561037 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
MIR9-3HG-211ENST00000561037 RB1CC1Q8TDY2 1594 aa13.91□□□□□ -0.18
MIR9-3HG-211ENST00000561037 NACADO15069 1562 aa13.8□□□□□ -0.2
MIR9-3HG-211ENST00000561037 SLC4A2P04920 1241 aa13.66□□□□□ -0.22
MIR9-3HG-211ENST00000561037 PABPN1Q86U42 306 aaKnown RBP eCLIP13.62□□□□□ -0.23
MIR9-3HG-211ENST00000561037 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
MIR9-3HG-211ENST00000561037 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
MIR9-3HG-211ENST00000561037 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
MIR9-3HG-211ENST00000561037 UNC13AQ9UPW8 1703 aa13.48□□□□□ -0.25
MIR9-3HG-211ENST00000561037 ZCCHC6Q5VYS8 1495 aaKnown RBP13.48□□□□□ -0.25
MIR9-3HG-211ENST00000561037 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
MIR9-3HG-211ENST00000561037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.44□□□□□ -0.26
MIR9-3HG-211ENST00000561037 DCAF1Q9Y4B6 1507 aa13.43□□□□□ -0.26
MIR9-3HG-211ENST00000561037 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
MIR9-3HG-211ENST00000561037 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
MIR9-3HG-211ENST00000561037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.31□□□□□ -0.28
MIR9-3HG-211ENST00000561037 HNRNPUL2Q1KMD3 747 aaKnown RBP13.31□□□□□ -0.28
MIR9-3HG-211ENST00000561037 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
MIR9-3HG-211ENST00000561037 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
MIR9-3HG-211ENST00000561037 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
MIR9-3HG-211ENST00000561037 CC2D2AQ9P2K1 1620 aa13.15□□□□□ -0.3
MIR9-3HG-211ENST00000561037 CECR2Q9BXF3 1484 aa13.14□□□□□ -0.31
MIR9-3HG-211ENST00000561037 EIF4G1Q04637 1599 aaKnown RBP13.13□□□□□ -0.31
MIR9-3HG-211ENST00000561037 APLP2Q06481 763 aa13.1□□□□□ -0.31
MIR9-3HG-211ENST00000561037 ATF5Q9Y2D1 282 aaPredicted RBP13.03□□□□□ -0.32
MIR9-3HG-211ENST00000561037 ZNF219Q9P2Y4 722 aaPredicted RBP12.88□□□□□ -0.35
MIR9-3HG-211ENST00000561037 FKBP8Q14318 412 aa12.87□□□□□ -0.35
MIR9-3HG-211ENST00000561037 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
MIR9-3HG-211ENST00000561037 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
MIR9-3HG-211ENST00000561037 NCAPD3P42695 1498 aa12.74□□□□□ -0.37
MIR9-3HG-211ENST00000561037 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
MIR9-3HG-211ENST00000561037 CACNB1Q02641 598 aaPredicted RBP12.7□□□□□ -0.38
MIR9-3HG-211ENST00000561037 ATAD2BQ9ULI0 1458 aa12.7□□□□□ -0.38
MIR9-3HG-211ENST00000561037 SMARCA2P51531 1590 aa12.69□□□□□ -0.38
MIR9-3HG-211ENST00000561037 CAPN15O75808 1086 aa12.69□□□□□ -0.38
MIR9-3HG-211ENST00000561037 SPINK5Q9NQ38 1064 aaPredicted RBP12.68□□□□□ -0.38
MIR9-3HG-211ENST00000561037 SMARCA4P51532 1647 aa12.68□□□□□ -0.38
MIR9-3HG-211ENST00000561037 BAZ1AQ9NRL2 1556 aaPredicted RBP12.66□□□□□ -0.38
MIR9-3HG-211ENST00000561037 ERCC6Q03468 1493 aa12.65□□□□□ -0.38
MIR9-3HG-211ENST00000561037 HMGXB3Q12766 1538 aa12.62□□□□□ -0.39
MIR9-3HG-211ENST00000561037 BAZ1BQ9UIG0 1483 aaKnown RBP12.62□□□□□ -0.39
MIR9-3HG-211ENST00000561037 FBLN2P98095 1184 aa12.61□□□□□ -0.39
MIR9-3HG-211ENST00000561037 POLA2Q14181 598 aa12.61□□□□□ -0.39
MIR9-3HG-211ENST00000561037 CUX2O14529 1486 aa12.55□□□□□ -0.4
MIR9-3HG-211ENST00000561037 MROH2BQ7Z745 1585 aa12.53□□□□□ -0.4
MIR9-3HG-211ENST00000561037 PEG3Q9GZU2 1588 aa12.53□□□□□ -0.4
MIR9-3HG-211ENST00000561037 DNAJC5Q9H3Z4 198 aa12.52□□□□□ -0.41
MIR9-3HG-211ENST00000561037 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
MIR9-3HG-211ENST00000561037 ZBTB12Q9Y330 459 aaPredicted RBP12.51□□□□□ -0.41
MIR9-3HG-211ENST00000561037 NESP48681 1621 aa12.51□□□□□ -0.41
MIR9-3HG-211ENST00000561037 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
MIR9-3HG-211ENST00000561037 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
MIR9-3HG-211ENST00000561037 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.42
MIR9-3HG-211ENST00000561037 PDS5BQ9NTI5 1447 aa12.44□□□□□ -0.42
MIR9-3HG-211ENST00000561037 ABCB7O75027 752 aa12.43□□□□□ -0.42
MIR9-3HG-211ENST00000561037 FBXO3Q9UK99 471 aa12.42□□□□□ -0.42
MIR9-3HG-211ENST00000561037 WIZO95785 1651 aa12.38□□□□□ -0.43
MIR9-3HG-211ENST00000561037 RTN4Q9NQC3 1192 aaKnown RBP12.38□□□□□ -0.43
MIR9-3HG-211ENST00000561037 CADPSQ9ULU8 1353 aa12.38□□□□□ -0.43
MIR9-3HG-211ENST00000561037 DSG3P32926 999 aa12.34□□□□□ -0.43
MIR9-3HG-211ENST00000561037 THOC2Q8NI27 1593 aaKnown RBP12.34□□□□□ -0.43
MIR9-3HG-211ENST00000561037 KIF21AQ7Z4S6 1674 aa12.33□□□□□ -0.44
MIR9-3HG-211ENST00000561037 PROM2Q8N271 834 aa12.31□□□□□ -0.44
MIR9-3HG-211ENST00000561037 RSF1Q96T23 1441 aaPredicted RBP12.3□□□□□ -0.44
MIR9-3HG-211ENST00000561037 MRC2Q9UBG0 1479 aa12.28□□□□□ -0.44
MIR9-3HG-211ENST00000561037 CEP164Q9UPV0 1460 aa12.26□□□□□ -0.45
MIR9-3HG-211ENST00000561037 TOP2AP11388 1531 aaKnown RBP12.24□□□□□ -0.45
MIR9-3HG-211ENST00000561037 FANCD2Q9BXW9 1451 aa12.23□□□□□ -0.45
MIR9-3HG-211ENST00000561037 CFTRP13569 1480 aa12.21□□□□□ -0.45
MIR9-3HG-211ENST00000561037 WDR62O43379 1518 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms