Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MAPK10-287ENST00000641217 3037 ntBASIC5.45□□□□□ -1.54
CHD8Q9HCK8 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 RNU1-77P-201ENST00000390868 162 ntBASIC5.45□□□□□ -1.54
CHD8Q9HCK8 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 PRELID1P2-201ENST00000407805 396 ntBASIC5.45□□□□□ -1.54
CHD8Q9HCK8 OR5W1P-201ENST00000423705 938 ntBASIC5.45□□□□□ -1.54
CHD8Q9HCK8 PSMC1P2-201ENST00000423961 1204 ntBASIC5.45□□□□□ -1.54
CHD8Q9HCK8 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 HMGB3P24-201ENST00000433260 622 ntBASIC5.45□□□□□ -1.54
CHD8Q9HCK8 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 SDC4P-201ENST00000453285 601 ntBASIC5.45□□□□□ -1.54
CHD8Q9HCK8 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 AC013701.1-201ENST00000522657 465 ntBASIC5.45□□□□□ -1.54
CHD8Q9HCK8 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 MIR5096-201ENST00000583713 70 ntBASIC5.45□□□□□ -1.54
CHD8Q9HCK8 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.45□□□□□ -1.54
CHD8Q9HCK8 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CHD8Q9HCK8 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 CASC19-281ENST00000642118 1554 ntBASIC5.44□□□□□ -1.54
CHD8Q9HCK8 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 MFSD8-219ENST00000641228 2559 ntBASIC5.44□□□□□ -1.54
CHD8Q9HCK8 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 SAP18P1-201ENST00000512058 390 ntBASIC5.44□□□□□ -1.54
CHD8Q9HCK8 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC5.44□□□□□ -1.54
CHD8Q9HCK8 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 MROH3P-201ENST00000435735 2676 ntBASIC5.44□□□□□ -1.54
CHD8Q9HCK8 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 RNU4-4P-201ENST00000364588 130 ntBASIC5.44□□□□□ -1.54
CHD8Q9HCK8 SNORA57.1-201ENST00000391227 145 ntBASIC5.44□□□□□ -1.54
CHD8Q9HCK8 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 AC093162.1-201ENST00000419682 124 ntBASIC5.44□□□□□ -1.54
CHD8Q9HCK8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 AC092375.1-201ENST00000550410 637 ntBASIC5.44□□□□□ -1.54
CHD8Q9HCK8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CHD8Q9HCK8 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 AL133388.1-201ENST00000404509 287 ntBASIC5.43□□□□□ -1.54
CHD8Q9HCK8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 RPS7P3-201ENST00000443360 580 ntBASIC5.43□□□□□ -1.54
CHD8Q9HCK8 MED28P3-201ENST00000444288 531 ntBASIC5.43□□□□□ -1.54
CHD8Q9HCK8 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 RANP2-201ENST00000456833 229 ntBASIC5.43□□□□□ -1.54
CHD8Q9HCK8 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 RN7SL570P-201ENST00000484405 292 ntBASIC5.43□□□□□ -1.54
CHD8Q9HCK8 NIP7P2-201ENST00000485801 544 ntBASIC5.43□□□□□ -1.54
CHD8Q9HCK8 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 GTF2IP11-201ENST00000526931 420 ntBASIC5.43□□□□□ -1.54
CHD8Q9HCK8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CHD8Q9HCK8 AC034229.5-201ENST00000624258 185 ntBASIC5.43□□□□□ -1.54
CHD8Q9HCK8 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.43□□□□□ -1.54
CHD8Q9HCK8 ZNF733P-202ENST00000444809 1573 ntBASIC5.43□□□□□ -1.54
CHD8Q9HCK8 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms