RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 NISCHQ9Y2I1 1504 aa14.78□□□□□ -0.04
TRIM49B-202ENST00000622138 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
TRIM49B-202ENST00000622138 MYT1Q01538 1121 aa12.85□□□□□ -0.35
TRIM49B-202ENST00000622138 SHROOM4Q9ULL8 1493 aa12.71□□□□□ -0.38
TRIM49B-202ENST00000622138 HRCP23327 699 aa12.67□□□□□ -0.38
TRIM49B-202ENST00000622138 ZCCHC6Q5VYS8 1495 aaKnown RBP12.54□□□□□ -0.4
TRIM49B-202ENST00000622138 CCDC180Q9P1Z9 1646 aa12.52□□□□□ -0.41
TRIM49B-202ENST00000622138 SUPT5HO00267 1087 aaKnown RBP12.45□□□□□ -0.42
TRIM49B-202ENST00000622138 TTBK1Q5TCY1 1321 aaPredicted RBP12.27□□□□□ -0.45
TRIM49B-202ENST00000622138 MYO15BQ96JP2 1530 aa12.24□□□□□ -0.45
TRIM49B-202ENST00000622138 DCAF8L2P0C7V8 631 aa12.18□□□□□ -0.46
TRIM49B-202ENST00000622138 CHIC1Q5VXU3 224 aa12.16□□□□□ -0.46
TRIM49B-202ENST00000622138 SCAF1Q9H7N4 1312 aaKnown RBP12.15□□□□□ -0.46
TRIM49B-202ENST00000622138 PPARGC1BQ86YN6 1023 aaKnown RBP12.14□□□□□ -0.47
TRIM49B-202ENST00000622138 DCAF1Q9Y4B6 1507 aa12.1□□□□□ -0.47
TRIM49B-202ENST00000622138 PCGF6Q9BYE7 350 aa11.99□□□□□ -0.49
TRIM49B-202ENST00000622138 ABCC9O60706 1549 aa11.88□□□□□ -0.51
TRIM49B-202ENST00000622138 ZEB1P37275 1124 aaPredicted RBP11.85□□□□□ -0.51
TRIM49B-202ENST00000622138 LOC105371045A0A1W2PR82 267 aa11.82□□□□□ -0.52
TRIM49B-202ENST00000622138 SCRIBQ14160 1630 aa11.8□□□□□ -0.52
TRIM49B-202ENST00000622138 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
TRIM49B-202ENST00000622138 RSF1Q96T23 1441 aaPredicted RBP11.74□□□□□ -0.53
TRIM49B-202ENST00000622138 RB1CC1Q8TDY2 1594 aa11.69□□□□□ -0.54
TRIM49B-202ENST00000622138 CENPBP07199 599 aaPredicted RBP11.68□□□□□ -0.54
TRIM49B-202ENST00000622138 BCL11AQ9H165 835 aa11.67□□□□□ -0.54
TRIM49B-202ENST00000622138 TRIM26Q12899 539 aaPredicted RBP11.66□□□□□ -0.54
TRIM49B-202ENST00000622138 NEUROD1Q13562 356 aa11.63□□□□□ -0.55
TRIM49B-202ENST00000622138 GTF3C3Q9Y5Q9 886 aa11.62□□□□□ -0.55
TRIM49B-202ENST00000622138 PRKCSHP14314 528 aaPredicted RBP11.6□□□□□ -0.55
TRIM49B-202ENST00000622138 CECR2Q9BXF3 1484 aa11.57□□□□□ -0.56
TRIM49B-202ENST00000622138 TRIM41Q8WV44 630 aa11.55□□□□□ -0.56
TRIM49B-202ENST00000622138 MROH2BQ7Z745 1585 aa11.53□□□□□ -0.56
TRIM49B-202ENST00000622138 NACADO15069 1562 aa11.52□□□□□ -0.56
TRIM49B-202ENST00000622138 FAM9AQ8IZU1 332 aaPredicted RBP11.51□□□□□ -0.57
TRIM49B-202ENST00000622138 ERICH6Q7L0X2 663 aa11.51□□□□□ -0.57
TRIM49B-202ENST00000622138 WIZO95785 1651 aa11.48□□□□□ -0.57
TRIM49B-202ENST00000622138 EHMT2Q96KQ7 1210 aa11.44□□□□□ -0.58
TRIM49B-202ENST00000622138 EIF4G1Q04637 1599 aaKnown RBP11.41□□□□□ -0.58
TRIM49B-202ENST00000622138 ANP32EQ9BTT0 268 aa11.41□□□□□ -0.58
TRIM49B-202ENST00000622138 BAZ1AQ9NRL2 1556 aaPredicted RBP11.4□□□□□ -0.58
TRIM49B-202ENST00000622138 APLP2Q06481 763 aa11.38□□□□□ -0.59
TRIM49B-202ENST00000622138 POTEDQ86YR6 584 aa11.32□□□□□ -0.6
TRIM49B-202ENST00000622138 AEBP2Q6ZN18 517 aaPredicted RBP11.28□□□□□ -0.6
TRIM49B-202ENST00000622138 DIEXFQ68CQ4 756 aaKnown RBP11.28□□□□□ -0.6
TRIM49B-202ENST00000622138 TOP2AP11388 1531 aaKnown RBP11.28□□□□□ -0.6
TRIM49B-202ENST00000622138 CLSPNQ9HAW4 1339 aa11.28□□□□□ -0.6
TRIM49B-202ENST00000622138 ABCC8Q09428 1581 aa11.27□□□□□ -0.61
TRIM49B-202ENST00000622138 SMARCA4P51532 1647 aa11.26□□□□□ -0.61
TRIM49B-202ENST00000622138 UNC13AQ9UPW8 1703 aa11.24□□□□□ -0.61
TRIM49B-202ENST00000622138 SMARCA2P51531 1590 aa11.24□□□□□ -0.61
TRIM49B-202ENST00000622138 CCDC88BA6NC98 1476 aa11.23□□□□□ -0.61
TRIM49B-202ENST00000622138 CSRNP3Q8WYN3 585 aa11.19□□□□□ -0.62
TRIM49B-202ENST00000622138 SOGA1O94964 1423 aa11.16□□□□□ -0.62
TRIM49B-202ENST00000622138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.15□□□□□ -0.62
TRIM49B-202ENST00000622138 CEP162Q5TB80 1403 aa11.13□□□□□ -0.63
TRIM49B-202ENST00000622138 RUSC2Q8N2Y8 1516 aa11.13□□□□□ -0.63
TRIM49B-202ENST00000622138 WRNQ14191 1432 aaPredicted RBP eCLIP11.12□□□□□ -0.63
TRIM49B-202ENST00000622138 BICRAQ9NZM4 1560 aa11.09□□□□□ -0.63
TRIM49B-202ENST00000622138 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
TRIM49B-202ENST00000622138 CCER1Q8TC90 406 aaPredicted RBP11.07□□□□□ -0.64
TRIM49B-202ENST00000622138 TNIKQ9UKE5 1360 aa11.07□□□□□ -0.64
TRIM49B-202ENST00000622138 PABPN1Q86U42 306 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRIM49B-202ENST00000622138 EEA1Q15075 1411 aa11.03□□□□□ -0.64
TRIM49B-202ENST00000622138 SUPT16HQ9Y5B9 1047 aaKnown RBP11.01□□□□□ -0.65
TRIM49B-202ENST00000622138 SYNJ1O43426 1573 aa11.01□□□□□ -0.65
TRIM49B-202ENST00000622138 PEG3Q9GZU2 1588 aa11.01□□□□□ -0.65
TRIM49B-202ENST00000622138 GOLGA3Q08378 1498 aa11.01□□□□□ -0.65
TRIM49B-202ENST00000622138 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
TRIM49B-202ENST00000622138 YTHDC1Q96MU7 727 aaKnown RBP11□□□□□ -0.65
TRIM49B-202ENST00000622138 UBTFP17480 764 aaKnown RBP10.98□□□□□ -0.65
TRIM49B-202ENST00000622138 MYT1LQ9UL68 1186 aa10.95□□□□□ -0.66
TRIM49B-202ENST00000622138 KIF21BO75037 1637 aa10.94□□□□□ -0.66
TRIM49B-202ENST00000622138 ATAD2BQ9ULI0 1458 aa10.93□□□□□ -0.66
TRIM49B-202ENST00000622138 CEP164Q9UPV0 1460 aa10.92□□□□□ -0.66
TRIM49B-202ENST00000622138 BAZ1BQ9UIG0 1483 aaKnown RBP10.89□□□□□ -0.67
TRIM49B-202ENST00000622138 CLIP1P30622 1438 aa10.89□□□□□ -0.67
TRIM49B-202ENST00000622138 MIER1Q8N108 512 aa10.88□□□□□ -0.67
TRIM49B-202ENST00000622138 RAPGEF2Q9Y4G8 1499 aa10.88□□□□□ -0.67
TRIM49B-202ENST00000622138 VPS8Q8N3P4 1428 aa10.85□□□□□ -0.67
TRIM49B-202ENST00000622138 HNRNPUL2Q1KMD3 747 aaKnown RBP10.83□□□□□ -0.68
TRIM49B-202ENST00000622138 ERICH6BQ5W0A0 696 aa10.83□□□□□ -0.68
TRIM49B-202ENST00000622138 UBE2Q2Q8WVN8 375 aa10.83□□□□□ -0.68
TRIM49B-202ENST00000622138 TOP2BQ02880 1626 aa10.83□□□□□ -0.68
TRIM49B-202ENST00000622138 RANGAP1P46060 587 aaPredicted RBP10.8□□□□□ -0.68
TRIM49B-202ENST00000622138 BIVM-ERCC5R4GMW8 1640 aa10.8□□□□□ -0.68
TRIM49B-202ENST00000622138 ANO8Q9HCE9 1232 aaPredicted RBP10.79□□□□□ -0.68
TRIM49B-202ENST00000622138 RBM19Q9Y4C8 960 aaKnown RBP10.76□□□□□ -0.69
TRIM49B-202ENST00000622138 ARAP1Q96P48 1450 aa10.75□□□□□ -0.69
TRIM49B-202ENST00000622138 PRXQ9BXM0 1461 aa10.74□□□□□ -0.69
TRIM49B-202ENST00000622138 ERICH3Q5RHP9 1530 aa10.73□□□□□ -0.69
TRIM49B-202ENST00000622138 FANCIQ9NVI1 1328 aa10.73□□□□□ -0.69
TRIM49B-202ENST00000622138 CUX1P39880 1505 aa10.73□□□□□ -0.69
TRIM49B-202ENST00000622138 HMGXB3Q12766 1538 aa10.69□□□□□ -0.7
TRIM49B-202ENST00000622138 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
TRIM49B-202ENST00000622138 MSH5O43196 834 aa10.69□□□□□ -0.7
TRIM49B-202ENST00000622138 DEKP35659 375 aaKnown RBP10.69□□□□□ -0.7
TRIM49B-202ENST00000622138 KANK4Q5T7N3 995 aaPredicted RBP10.67□□□□□ -0.7
TRIM49B-202ENST00000622138 NCAPD3P42695 1498 aa10.67□□□□□ -0.7
TRIM49B-202ENST00000622138 DHX57Q6P158 1386 aaKnown RBP10.66□□□□□ -0.7
TRIM49B-202ENST00000622138 EIF5BO60841 1220 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms