Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 AC021422.1-201ENST00000621212 473 ntBASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 LINC00216-201ENST00000623548 1126 ntBASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 OR7E91P-202ENST00000642062 1198 ntBASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CHMP4CQ96CF2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.46□□□□□ -1.21
CHMP4CQ96CF2 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC7.46□□□□□ -1.21
CHMP4CQ96CF2 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
CHMP4CQ96CF2 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 PSMD10P2-201ENST00000432890 672 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 RPL5P10-201ENST00000445207 894 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 RN7SL643P-201ENST00000471845 291 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 MTND3P24-201ENST00000506306 329 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 SNX18P25-201ENST00000510539 758 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 HSD3BP3-201ENST00000514706 994 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 SNORA74.1-201ENST00000516320 180 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 IGHV4-55-201ENST00000520889 368 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 CYCSP25-201ENST00000525280 316 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 OR4V1P-201ENST00000525394 1140 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AL121579.2-201ENST00000555466 590 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 MRPS21P8-201ENST00000569196 235 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AC016542.1-201ENST00000608259 493 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AL008723.3-201ENST00000608926 449 ntBASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.46□□□□□ -1.22
CHMP4CQ96CF2 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 RNU4-39P-201ENST00000362455 127 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AMZ2P2-201ENST00000406819 1057 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC092865.3-201ENST00000425390 1026 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 MTND2P25-201ENST00000449028 610 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 MTND5P8-201ENST00000449817 1083 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AL353718.1-201ENST00000451028 517 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC103563.5-201ENST00000455643 364 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AP002884.1-201ENST00000479691 655 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 RPL12P30-201ENST00000488389 499 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC112206.4-201ENST00000515142 405 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC107958.1-201ENST00000556576 290 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC026898.1-201ENST00000586404 571 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC005332.4-201ENST00000592752 579 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AL158211.2-201ENST00000607282 395 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AL591926.1-201ENST00000620542 217 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 MIR7159-201ENST00000620587 66 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 FO681491.1-202ENST00000623392 737 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 AL162377.2-201ENST00000624532 337 ntBASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.45□□□□□ -1.22
CHMP4CQ96CF2 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms