RNA–Protein interactions for RNA: ENST00000605627.1

SMAGP-208, Transcript of small cell adhesion glycoprotein, humanhuman

TSL 5 BASIC

Gene SMAGP, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAGP-208ENST00000605627 AEBP2Q6ZN18 517 aaPredicted RBP19.48■□□□□ 0.71
SMAGP-208ENST00000605627 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
SMAGP-208ENST00000605627 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
SMAGP-208ENST00000605627 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
SMAGP-208ENST00000605627 NISCHQ9Y2I1 1504 aa15.81■□□□□ 0.12
SMAGP-208ENST00000605627 FOXD1Q16676 465 aa15.41■□□□□ 0.06
SMAGP-208ENST00000605627 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
SMAGP-208ENST00000605627 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
SMAGP-208ENST00000605627 ADRA2BP18089 450 aa14.48□□□□□ -0.09
SMAGP-208ENST00000605627 PIAS4Q8N2W9 510 aaPredicted RBP14.39□□□□□ -0.11
SMAGP-208ENST00000605627 MSH5O43196 834 aa14.26□□□□□ -0.13
SMAGP-208ENST00000605627 CCDC180Q9P1Z9 1646 aa14.01□□□□□ -0.17
SMAGP-208ENST00000605627 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
SMAGP-208ENST00000605627 ABCC9O60706 1549 aa13.72□□□□□ -0.21
SMAGP-208ENST00000605627 MAPK8IP2Q13387 824 aaPredicted RBP13.29□□□□□ -0.28
SMAGP-208ENST00000605627 ZCCHC6Q5VYS8 1495 aaKnown RBP13.17□□□□□ -0.3
SMAGP-208ENST00000605627 NACADO15069 1562 aa13.17□□□□□ -0.3
SMAGP-208ENST00000605627 MYO15BQ96JP2 1530 aa13.16□□□□□ -0.3
SMAGP-208ENST00000605627 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
SMAGP-208ENST00000605627 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
SMAGP-208ENST00000605627 DCAF1Q9Y4B6 1507 aa13.09□□□□□ -0.31
SMAGP-208ENST00000605627 SCAF1Q9H7N4 1312 aaKnown RBP13.06□□□□□ -0.32
SMAGP-208ENST00000605627 DCAF8L2P0C7V8 631 aa13.01□□□□□ -0.33
SMAGP-208ENST00000605627 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
SMAGP-208ENST00000605627 UNC13AQ9UPW8 1703 aa12.98□□□□□ -0.33
SMAGP-208ENST00000605627 BICRAQ9NZM4 1560 aa12.94□□□□□ -0.34
SMAGP-208ENST00000605627 PABPN1Q86U42 306 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMAGP-208ENST00000605627 DNAJC5BQ9UF47 199 aa12.82□□□□□ -0.36
SMAGP-208ENST00000605627 SCRIBQ14160 1630 aa12.74□□□□□ -0.37
SMAGP-208ENST00000605627 CNKSR2Q8WXI2 1034 aa12.7□□□□□ -0.38
SMAGP-208ENST00000605627 HOXD11P31277 338 aaPredicted RBP12.65□□□□□ -0.38
SMAGP-208ENST00000605627 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
SMAGP-208ENST00000605627 RNF216Q9NWF9 866 aaPredicted RBP12.56□□□□□ -0.4
SMAGP-208ENST00000605627 DCAF8L1A6NGE4 600 aa12.55□□□□□ -0.4
SMAGP-208ENST00000605627 EIF4G1Q04637 1599 aaKnown RBP12.49□□□□□ -0.41
SMAGP-208ENST00000605627 CC2D2AQ9P2K1 1620 aa12.44□□□□□ -0.42
SMAGP-208ENST00000605627 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
SMAGP-208ENST00000605627 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
SMAGP-208ENST00000605627 CECR2Q9BXF3 1484 aa12.38□□□□□ -0.43
SMAGP-208ENST00000605627 KCNA4P22459 653 aa12.29□□□□□ -0.44
SMAGP-208ENST00000605627 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
SMAGP-208ENST00000605627 SMARCA4P51532 1647 aa12.25□□□□□ -0.45
SMAGP-208ENST00000605627 NCAPD3P42695 1498 aa12.23□□□□□ -0.45
SMAGP-208ENST00000605627 MROH2BQ7Z745 1585 aa12.22□□□□□ -0.45
SMAGP-208ENST00000605627 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.45
SMAGP-208ENST00000605627 CACNB1Q02641 598 aaPredicted RBP12.21□□□□□ -0.45
SMAGP-208ENST00000605627 PEG3Q9GZU2 1588 aa12.19□□□□□ -0.46
SMAGP-208ENST00000605627 BAZ1AQ9NRL2 1556 aaPredicted RBP12.18□□□□□ -0.46
SMAGP-208ENST00000605627 HMGXB3Q12766 1538 aa12.11□□□□□ -0.47
SMAGP-208ENST00000605627 SMARCA2P51531 1590 aa12.1□□□□□ -0.47
SMAGP-208ENST00000605627 RSF1Q96T23 1441 aaPredicted RBP12.06□□□□□ -0.48
SMAGP-208ENST00000605627 WIZO95785 1651 aa12.04□□□□□ -0.48
SMAGP-208ENST00000605627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMAGP-208ENST00000605627 BAZ1BQ9UIG0 1483 aaKnown RBP12.01□□□□□ -0.49
SMAGP-208ENST00000605627 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
SMAGP-208ENST00000605627 NESP48681 1621 aa11.94□□□□□ -0.5
SMAGP-208ENST00000605627 TOP2AP11388 1531 aaKnown RBP11.87□□□□□ -0.51
SMAGP-208ENST00000605627 U3KPZ7 1027 aaPredicted RBP11.86□□□□□ -0.51
SMAGP-208ENST00000605627 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
SMAGP-208ENST00000605627 LAMC3Q9Y6N6 1575 aa11.83□□□□□ -0.52
SMAGP-208ENST00000605627 CADPSQ9ULU8 1353 aa11.82□□□□□ -0.52
SMAGP-208ENST00000605627 CCDC88BA6NC98 1476 aa11.78□□□□□ -0.52
SMAGP-208ENST00000605627 CFTRP13569 1480 aa11.78□□□□□ -0.52
SMAGP-208ENST00000605627 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
SMAGP-208ENST00000605627 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
SMAGP-208ENST00000605627 PDS5BQ9NTI5 1447 aa11.7□□□□□ -0.54
SMAGP-208ENST00000605627 CUX2O14529 1486 aa11.7□□□□□ -0.54
SMAGP-208ENST00000605627 ERCC6Q03468 1493 aa11.7□□□□□ -0.54
SMAGP-208ENST00000605627 SPINK5Q9NQ38 1064 aaPredicted RBP11.68□□□□□ -0.54
SMAGP-208ENST00000605627 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.54
SMAGP-208ENST00000605627 WDR62O43379 1518 aa11.63□□□□□ -0.55
SMAGP-208ENST00000605627 URB2Q14146 1524 aaKnown RBP11.62□□□□□ -0.55
SMAGP-208ENST00000605627 MRC2Q9UBG0 1479 aa11.62□□□□□ -0.55
SMAGP-208ENST00000605627 PRDM2Q13029 1718 aa11.61□□□□□ -0.55
SMAGP-208ENST00000605627 CEP164Q9UPV0 1460 aa11.6□□□□□ -0.55
SMAGP-208ENST00000605627 CAPN15O75808 1086 aa11.58□□□□□ -0.56
SMAGP-208ENST00000605627 SUPT5HO00267 1087 aaKnown RBP11.57□□□□□ -0.56
SMAGP-208ENST00000605627 SLC4A1APQ9BWU0 796 aaKnown RBP11.55□□□□□ -0.56
SMAGP-208ENST00000605627 DSG3P32926 999 aa11.52□□□□□ -0.57
SMAGP-208ENST00000605627 TOPBP1Q92547 1522 aa11.5□□□□□ -0.57
SMAGP-208ENST00000605627 DNAJC5Q9H3Z4 198 aa11.45□□□□□ -0.58
SMAGP-208ENST00000605627 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
SMAGP-208ENST00000605627 TRHP20396 242 aaPredicted RBP11.44□□□□□ -0.58
SMAGP-208ENST00000605627 CUX1P39880 1505 aa11.44□□□□□ -0.58
SMAGP-208ENST00000605627 TARBP1Q13395 1621 aaKnown RBP11.43□□□□□ -0.58
SMAGP-208ENST00000605627 ZNF608Q9ULD9 1512 aaPredicted RBP11.42□□□□□ -0.58
SMAGP-208ENST00000605627 POLA1P09884 1462 aaPredicted RBP11.41□□□□□ -0.58
SMAGP-208ENST00000605627 ABCC8Q09428 1581 aa11.41□□□□□ -0.58
SMAGP-208ENST00000605627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.39□□□□□ -0.59
SMAGP-208ENST00000605627 ABCB7O75027 752 aa11.39□□□□□ -0.59
SMAGP-208ENST00000605627 MYCNP04198 464 aaPredicted RBP11.39□□□□□ -0.59
SMAGP-208ENST00000605627 HNRNPUL2Q1KMD3 747 aaKnown RBP11.39□□□□□ -0.59
SMAGP-208ENST00000605627 SAMD1Q6SPF0 538 aaPredicted RBP11.38□□□□□ -0.59
SMAGP-208ENST00000605627 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
SMAGP-208ENST00000605627 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
SMAGP-208ENST00000605627 ZBTB22O15209 634 aa11.35□□□□□ -0.59
SMAGP-208ENST00000605627 FOXD4L1Q9NU39 408 aa11.35□□□□□ -0.59
SMAGP-208ENST00000605627 ZNF219Q9P2Y4 722 aaPredicted RBP11.35□□□□□ -0.59
SMAGP-208ENST00000605627 FGD5Q6ZNL6 1462 aa11.35□□□□□ -0.59
SMAGP-208ENST00000605627 APLP2Q06481 763 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms