RNA–Protein interactions for RNA: ENST00000554319.1

AL139354.1-201, humanhuman

TSL 5 BASIC

Gene AL139354.1, Length 645 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139354.1-201ENST00000554319 AEBP2Q6ZN18 517 aaPredicted RBP27.11■■□□□ 1.93
AL139354.1-201ENST00000554319 CHIC1Q5VXU3 224 aa26.01■■□□□ 1.75
AL139354.1-201ENST00000554319 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
AL139354.1-201ENST00000554319 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
AL139354.1-201ENST00000554319 FOXD1Q16676 465 aa21.52■■□□□ 1.04
AL139354.1-201ENST00000554319 PLPPR3Q6T4P5 718 aa20.88■□□□□ 0.93
AL139354.1-201ENST00000554319 PPP6R1Q9UPN7 881 aa20.24■□□□□ 0.83
AL139354.1-201ENST00000554319 MSH5O43196 834 aa20.15■□□□□ 0.82
AL139354.1-201ENST00000554319 ADRA2BP18089 450 aa20.15■□□□□ 0.82
AL139354.1-201ENST00000554319 PIAS4Q8N2W9 510 aaPredicted RBP20.13■□□□□ 0.81
AL139354.1-201ENST00000554319 POTEDQ86YR6 584 aa19.26■□□□□ 0.67
AL139354.1-201ENST00000554319 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
AL139354.1-201ENST00000554319 MAPK8IP2Q13387 824 aaPredicted RBP18.44■□□□□ 0.54
AL139354.1-201ENST00000554319 DMRT2Q9Y5R5 561 aa18.42■□□□□ 0.54
AL139354.1-201ENST00000554319 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
AL139354.1-201ENST00000554319 CNKSR2Q8WXI2 1034 aa17.95■□□□□ 0.46
AL139354.1-201ENST00000554319 HOXD11P31277 338 aaPredicted RBP17.85■□□□□ 0.45
AL139354.1-201ENST00000554319 RNF216Q9NWF9 866 aaPredicted RBP17.76■□□□□ 0.43
AL139354.1-201ENST00000554319 NCBP3Q53F19 620 aaKnown RBP17.69■□□□□ 0.42
AL139354.1-201ENST00000554319 DCAF8L1A6NGE4 600 aa17.47■□□□□ 0.39
AL139354.1-201ENST00000554319 NPM3O75607 178 aaKnown RBP17.38■□□□□ 0.37
AL139354.1-201ENST00000554319 DNAJC5BQ9UF47 199 aa17.34■□□□□ 0.37
AL139354.1-201ENST00000554319 KCNA4P22459 653 aa17.2■□□□□ 0.34
AL139354.1-201ENST00000554319 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
AL139354.1-201ENST00000554319 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
AL139354.1-201ENST00000554319 C1QBPQ07021 282 aaKnown RBP16.99■□□□□ 0.31
AL139354.1-201ENST00000554319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.9■□□□□ 0.3
AL139354.1-201ENST00000554319 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
AL139354.1-201ENST00000554319 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
AL139354.1-201ENST00000554319 SLC4A2P04920 1241 aa16.55■□□□□ 0.24
AL139354.1-201ENST00000554319 SLC4A1APQ9BWU0 796 aaKnown RBP16.52■□□□□ 0.24
AL139354.1-201ENST00000554319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
AL139354.1-201ENST00000554319 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
AL139354.1-201ENST00000554319 APLP2Q06481 763 aa16.25■□□□□ 0.19
AL139354.1-201ENST00000554319 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
AL139354.1-201ENST00000554319 CSRNP3Q8WYN3 585 aa16.21■□□□□ 0.19
AL139354.1-201ENST00000554319 CAPN15O75808 1086 aa16.19■□□□□ 0.18
AL139354.1-201ENST00000554319 SAMD1Q6SPF0 538 aaPredicted RBP16.17■□□□□ 0.18
AL139354.1-201ENST00000554319 DSG3P32926 999 aa16.14■□□□□ 0.17
AL139354.1-201ENST00000554319 MYCNP04198 464 aaPredicted RBP16.11■□□□□ 0.17
AL139354.1-201ENST00000554319 ZNF219Q9P2Y4 722 aaPredicted RBP16.06■□□□□ 0.16
AL139354.1-201ENST00000554319 FOXD4L1Q9NU39 408 aa16.02■□□□□ 0.16
AL139354.1-201ENST00000554319 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
AL139354.1-201ENST00000554319 ZBTB22O15209 634 aa15.82■□□□□ 0.12
AL139354.1-201ENST00000554319 ABCB7O75027 752 aa15.79■□□□□ 0.12
AL139354.1-201ENST00000554319 POLA2Q14181 598 aa15.64■□□□□ 0.09
AL139354.1-201ENST00000554319 ATXN8OSP0DMR3 200 aa15.62■□□□□ 0.09
AL139354.1-201ENST00000554319 ATF5Q9Y2D1 282 aaPredicted RBP15.62■□□□□ 0.09
AL139354.1-201ENST00000554319 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
AL139354.1-201ENST00000554319 ZBTB12Q9Y330 459 aaPredicted RBP15.44■□□□□ 0.06
AL139354.1-201ENST00000554319 POTEHQ6S545 545 aa15.14■□□□□ 0.01
AL139354.1-201ENST00000554319 AKT1S1Q96B36 256 aa15.13■□□□□ 0.01
AL139354.1-201ENST00000554319 OSCARQ8IYS5 282 aa15.08■□□□□ 0
AL139354.1-201ENST00000554319 FBLN2P98095 1184 aa15.07■□□□□ 0
AL139354.1-201ENST00000554319 SPDYE2BA6NHP3 402 aa14.96□□□□□ -0.01
AL139354.1-201ENST00000554319 SPDYE6P0CI01 402 aa14.96□□□□□ -0.01
AL139354.1-201ENST00000554319 MKRN4PQ13434 485 aaPredicted RBP14.96□□□□□ -0.01
AL139354.1-201ENST00000554319 SPDYE2Q495Y8 402 aa14.96□□□□□ -0.01
AL139354.1-201ENST00000554319 CHRDL2Q6WN34 429 aa14.96□□□□□ -0.01
AL139354.1-201ENST00000554319 REM2Q8IYK8 340 aaPredicted RBP14.92□□□□□ -0.02
AL139354.1-201ENST00000554319 SSUH2Q9Y2M2 353 aa14.77□□□□□ -0.05
AL139354.1-201ENST00000554319 PITPNM1O00562 1244 aa14.74□□□□□ -0.05
AL139354.1-201ENST00000554319 ZNF692Q9BU19 519 aaPredicted RBP14.74□□□□□ -0.05
AL139354.1-201ENST00000554319 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.06
AL139354.1-201ENST00000554319 FKBP8Q14318 412 aa14.64□□□□□ -0.07
AL139354.1-201ENST00000554319 PIP4P2Q8N4L2 257 aa14.64□□□□□ -0.07
AL139354.1-201ENST00000554319 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
AL139354.1-201ENST00000554319 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
AL139354.1-201ENST00000554319 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
AL139354.1-201ENST00000554319 AMER1Q5JTC6 1135 aaPredicted RBP14.43□□□□□ -0.1
AL139354.1-201ENST00000554319 SPDYE4A6NLX3 237 aa14.35□□□□□ -0.11
AL139354.1-201ENST00000554319 PRKAR2AP13861 404 aaKnown RBP14.35□□□□□ -0.11
AL139354.1-201ENST00000554319 RTN4Q9NQC3 1192 aaKnown RBP14.34□□□□□ -0.11
AL139354.1-201ENST00000554319 PRR29P0C7W0 189 aa14.33□□□□□ -0.12
AL139354.1-201ENST00000554319 SP7Q8TDD2 431 aaPredicted RBP14.3□□□□□ -0.12
AL139354.1-201ENST00000554319 HAX1O00165 279 aa14.28□□□□□ -0.12
AL139354.1-201ENST00000554319 STAG3Q9UJ98 1225 aa14.26□□□□□ -0.13
AL139354.1-201ENST00000554319 C19orf67A6NJJ6 358 aa14.17□□□□□ -0.14
AL139354.1-201ENST00000554319 CHADLQ6NUI6 762 aa14.16□□□□□ -0.14
AL139354.1-201ENST00000554319 PROM2Q8N271 834 aa14.15□□□□□ -0.14
AL139354.1-201ENST00000554319 EVX2Q03828 476 aa14.11□□□□□ -0.15
AL139354.1-201ENST00000554319 FARP1Q9Y4F1 1045 aaPredicted RBP14.08□□□□□ -0.16
AL139354.1-201ENST00000554319 CREBZFQ9NS37 354 aa14.03□□□□□ -0.16
AL139354.1-201ENST00000554319 FBXO3Q9UK99 471 aa14.03□□□□□ -0.16
AL139354.1-201ENST00000554319 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
AL139354.1-201ENST00000554319 CD44P16070 742 aaKnown RBP13.91□□□□□ -0.18
AL139354.1-201ENST00000554319 CLCN6P51797 869 aa13.89□□□□□ -0.19
AL139354.1-201ENST00000554319 GABBR2O75899 941 aa13.86□□□□□ -0.19
AL139354.1-201ENST00000554319 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
AL139354.1-201ENST00000554319 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
AL139354.1-201ENST00000554319 VASPP50552 380 aaPredicted RBP13.79□□□□□ -0.2
AL139354.1-201ENST00000554319 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
AL139354.1-201ENST00000554319 ZRANB1Q9UGI0 708 aa13.73□□□□□ -0.21
AL139354.1-201ENST00000554319 PAK3O75914 559 aaPredicted RBP13.7□□□□□ -0.22
AL139354.1-201ENST00000554319 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
AL139354.1-201ENST00000554319 MIER1Q8N108 512 aa13.65□□□□□ -0.22
AL139354.1-201ENST00000554319 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
AL139354.1-201ENST00000554319 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
AL139354.1-201ENST00000554319 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
AL139354.1-201ENST00000554319 PLCD3Q8N3E9 789 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms