RNA–Protein interactions for RNA: ENST00000623548.1

LINC00216-201, long intergenic non-protein coding RNA 216, humanhuman

BASIC

Gene LINC00216, Length 1,126 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00216-201ENST00000623548 AEBP2Q6ZN18 517 aaPredicted RBP25.52■■□□□ 1.68
LINC00216-201ENST00000623548 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
LINC00216-201ENST00000623548 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
LINC00216-201ENST00000623548 PHF23Q9BUL5 403 aaPredicted RBP21.56■■□□□ 1.04
LINC00216-201ENST00000623548 FOXD1Q16676 465 aa20.29■□□□□ 0.84
LINC00216-201ENST00000623548 PLPPR3Q6T4P5 718 aa19.61■□□□□ 0.73
LINC00216-201ENST00000623548 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
LINC00216-201ENST00000623548 ADRA2BP18089 450 aa19.02■□□□□ 0.64
LINC00216-201ENST00000623548 PIAS4Q8N2W9 510 aaPredicted RBP19.02■□□□□ 0.64
LINC00216-201ENST00000623548 MSH5O43196 834 aa19■□□□□ 0.63
LINC00216-201ENST00000623548 POTEDQ86YR6 584 aa18.27■□□□□ 0.52
LINC00216-201ENST00000623548 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
LINC00216-201ENST00000623548 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
LINC00216-201ENST00000623548 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
LINC00216-201ENST00000623548 PPP4R3CPQ6ZMV5 832 aa17.19■□□□□ 0.34
LINC00216-201ENST00000623548 KCNA4P22459 653 aa17.13■□□□□ 0.33
LINC00216-201ENST00000623548 CNKSR2Q8WXI2 1034 aa16.85■□□□□ 0.29
LINC00216-201ENST00000623548 HOXD11P31277 338 aaPredicted RBP16.72■□□□□ 0.27
LINC00216-201ENST00000623548 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
LINC00216-201ENST00000623548 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
LINC00216-201ENST00000623548 RNF216Q9NWF9 866 aaPredicted RBP16.65■□□□□ 0.26
LINC00216-201ENST00000623548 EHMT2Q96KQ7 1210 aa16.61■□□□□ 0.25
LINC00216-201ENST00000623548 SLC4A1APQ9BWU0 796 aaKnown RBP16.46■□□□□ 0.23
LINC00216-201ENST00000623548 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
LINC00216-201ENST00000623548 CACNB1Q02641 598 aaPredicted RBP16.24■□□□□ 0.19
LINC00216-201ENST00000623548 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
LINC00216-201ENST00000623548 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
LINC00216-201ENST00000623548 DNAJC5BQ9UF47 199 aa16.16■□□□□ 0.18
LINC00216-201ENST00000623548 C1QBPQ07021 282 aaKnown RBP16■□□□□ 0.15
LINC00216-201ENST00000623548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.15
LINC00216-201ENST00000623548 ZBTB22O15209 634 aa15.75■□□□□ 0.11
LINC00216-201ENST00000623548 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
LINC00216-201ENST00000623548 U3KPZ7 1027 aaPredicted RBP15.59■□□□□ 0.09
LINC00216-201ENST00000623548 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
LINC00216-201ENST00000623548 CAPN15O75808 1086 aa15.37■□□□□ 0.05
LINC00216-201ENST00000623548 SPINK5Q9NQ38 1064 aaPredicted RBP15.33■□□□□ 0.04
LINC00216-201ENST00000623548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.3■□□□□ 0.04
LINC00216-201ENST00000623548 APLP2Q06481 763 aa15.3■□□□□ 0.04
LINC00216-201ENST00000623548 HNRNPUL2Q1KMD3 747 aaKnown RBP15.3■□□□□ 0.04
LINC00216-201ENST00000623548 DSG3P32926 999 aa15.2■□□□□ 0.02
LINC00216-201ENST00000623548 SAMD1Q6SPF0 538 aaPredicted RBP15.2■□□□□ 0.02
LINC00216-201ENST00000623548 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
LINC00216-201ENST00000623548 TRHP20396 242 aaPredicted RBP15.15■□□□□ 0.02
LINC00216-201ENST00000623548 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
LINC00216-201ENST00000623548 ATXN8OSP0DMR3 200 aa15.12■□□□□ 0.01
LINC00216-201ENST00000623548 ABCB7O75027 752 aa14.98□□□□□ -0.01
LINC00216-201ENST00000623548 POLA2Q14181 598 aa14.76□□□□□ -0.05
LINC00216-201ENST00000623548 ATF5Q9Y2D1 282 aaPredicted RBP14.69□□□□□ -0.06
LINC00216-201ENST00000623548 FKBP8Q14318 412 aa14.6□□□□□ -0.07
LINC00216-201ENST00000623548 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
LINC00216-201ENST00000623548 ZBTB12Q9Y330 459 aaPredicted RBP14.51□□□□□ -0.09
LINC00216-201ENST00000623548 AMER1Q5JTC6 1135 aaPredicted RBP14.42□□□□□ -0.1
LINC00216-201ENST00000623548 POTEHQ6S545 545 aa14.37□□□□□ -0.11
LINC00216-201ENST00000623548 RTN4Q9NQC3 1192 aaKnown RBP14.3□□□□□ -0.12
LINC00216-201ENST00000623548 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
LINC00216-201ENST00000623548 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
LINC00216-201ENST00000623548 FBLN2P98095 1184 aa14.22□□□□□ -0.13
LINC00216-201ENST00000623548 CHRDL2Q6WN34 429 aa14.15□□□□□ -0.14
LINC00216-201ENST00000623548 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
LINC00216-201ENST00000623548 SPDYE2BA6NHP3 402 aa14.05□□□□□ -0.16
LINC00216-201ENST00000623548 SPDYE6P0CI01 402 aa14.05□□□□□ -0.16
LINC00216-201ENST00000623548 SPDYE2Q495Y8 402 aa14.05□□□□□ -0.16
LINC00216-201ENST00000623548 SPDYE4A6NLX3 237 aa14.04□□□□□ -0.16
LINC00216-201ENST00000623548 MKRN4PQ13434 485 aaPredicted RBP14.02□□□□□ -0.17
LINC00216-201ENST00000623548 FBXO3Q9UK99 471 aa14.02□□□□□ -0.17
LINC00216-201ENST00000623548 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
LINC00216-201ENST00000623548 PROM2Q8N271 834 aa13.92□□□□□ -0.18
LINC00216-201ENST00000623548 ZNF692Q9BU19 519 aaPredicted RBP13.91□□□□□ -0.18
LINC00216-201ENST00000623548 PITPNM1O00562 1244 aa13.9□□□□□ -0.18
LINC00216-201ENST00000623548 PIP4P2Q8N4L2 257 aa13.83□□□□□ -0.2
LINC00216-201ENST00000623548 SSUH2Q9Y2M2 353 aa13.82□□□□□ -0.2
LINC00216-201ENST00000623548 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
LINC00216-201ENST00000623548 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
LINC00216-201ENST00000623548 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
LINC00216-201ENST00000623548 VASPP50552 380 aaPredicted RBP13.74□□□□□ -0.21
LINC00216-201ENST00000623548 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
LINC00216-201ENST00000623548 HAX1O00165 279 aa13.6□□□□□ -0.23
LINC00216-201ENST00000623548 PRKAR2AP13861 404 aaKnown RBP13.58□□□□□ -0.24
LINC00216-201ENST00000623548 IFNLR1Q8IU57 520 aaPredicted RBP13.57□□□□□ -0.24
LINC00216-201ENST00000623548 PRR29P0C7W0 189 aa13.56□□□□□ -0.24
LINC00216-201ENST00000623548 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
LINC00216-201ENST00000623548 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
LINC00216-201ENST00000623548 CHADLQ6NUI6 762 aa13.43□□□□□ -0.26
LINC00216-201ENST00000623548 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
LINC00216-201ENST00000623548 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
LINC00216-201ENST00000623548 EVX2Q03828 476 aa13.35□□□□□ -0.27
LINC00216-201ENST00000623548 PKD2Q13563 968 aa13.34□□□□□ -0.27
LINC00216-201ENST00000623548 C19orf67A6NJJ6 358 aa13.32□□□□□ -0.28
LINC00216-201ENST00000623548 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
LINC00216-201ENST00000623548 DCAF8L2P0C7V8 631 aa13.29□□□□□ -0.28
LINC00216-201ENST00000623548 PLCB2Q00722 1185 aa13.27□□□□□ -0.29
LINC00216-201ENST00000623548 FARP1Q9Y4F1 1045 aaPredicted RBP13.27□□□□□ -0.29
LINC00216-201ENST00000623548 MIER1Q8N108 512 aa13.25□□□□□ -0.29
LINC00216-201ENST00000623548 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
LINC00216-201ENST00000623548 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
LINC00216-201ENST00000623548 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
LINC00216-201ENST00000623548 ECM2O94769 699 aaPredicted RBP13.17□□□□□ -0.3
LINC00216-201ENST00000623548 CD44P16070 742 aaKnown RBP13.15□□□□□ -0.3
LINC00216-201ENST00000623548 GABBR2O75899 941 aa13.11□□□□□ -0.31
LINC00216-201ENST00000623548 HAP1P54257 671 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms