RNA–Protein interactions for RNA: ENST00000608259.1

AC016542.1-201, humanhuman

BASIC

Gene AC016542.1, Length 493 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016542.1-201ENST00000608259 AEBP2Q6ZN18 517 aaPredicted RBP32.27■■■□□ 2.76
AC016542.1-201ENST00000608259 CHIC1Q5VXU3 224 aa31.41■■■□□ 2.62
AC016542.1-201ENST00000608259 PHF23Q9BUL5 403 aaPredicted RBP27.66■■■□□ 2.02
AC016542.1-201ENST00000608259 SENP3Q9H4L4 574 aaPredicted RBP27.34■■□□□ 1.97
AC016542.1-201ENST00000608259 PLPPR3Q6T4P5 718 aa25.46■■□□□ 1.67
AC016542.1-201ENST00000608259 FOXD1Q16676 465 aa25.43■■□□□ 1.66
AC016542.1-201ENST00000608259 PPP6R1Q9UPN7 881 aa24.44■■□□□ 1.5
AC016542.1-201ENST00000608259 ADRA2BP18089 450 aa24.4■■□□□ 1.5
AC016542.1-201ENST00000608259 PIAS4Q8N2W9 510 aaPredicted RBP23.93■■□□□ 1.42
AC016542.1-201ENST00000608259 MSH5O43196 834 aa23.42■■□□□ 1.34
AC016542.1-201ENST00000608259 POTEDQ86YR6 584 aa22.94■■□□□ 1.26
AC016542.1-201ENST00000608259 PPP4R3CPQ6ZMV5 832 aa22.45■■□□□ 1.18
AC016542.1-201ENST00000608259 SCAF1Q9H7N4 1312 aaKnown RBP22.27■■□□□ 1.16
AC016542.1-201ENST00000608259 MAPK8IP2Q13387 824 aaPredicted RBP22.18■■□□□ 1.14
AC016542.1-201ENST00000608259 KCNA4P22459 653 aa21.87■■□□□ 1.09
AC016542.1-201ENST00000608259 DMRT2Q9Y5R5 561 aa21.83■■□□□ 1.09
AC016542.1-201ENST00000608259 CNKSR2Q8WXI2 1034 aa21.82■■□□□ 1.08
AC016542.1-201ENST00000608259 NCBP3Q53F19 620 aaKnown RBP21.81■■□□□ 1.08
AC016542.1-201ENST00000608259 NPM3O75607 178 aaKnown RBP21.53■■□□□ 1.04
AC016542.1-201ENST00000608259 RNF216Q9NWF9 866 aaPredicted RBP21.4■■□□□ 1.02
AC016542.1-201ENST00000608259 HOXD11P31277 338 aaPredicted RBP21.35■■□□□ 1.01
AC016542.1-201ENST00000608259 DCAF8L1A6NGE4 600 aa20.9■□□□□ 0.94
AC016542.1-201ENST00000608259 DNAJC5BQ9UF47 199 aa20.88■□□□□ 0.93
AC016542.1-201ENST00000608259 SLC4A1APQ9BWU0 796 aaKnown RBP20.79■□□□□ 0.92
AC016542.1-201ENST00000608259 SLC4A2P04920 1241 aa20.36■□□□□ 0.85
AC016542.1-201ENST00000608259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.35■□□□□ 0.85
AC016542.1-201ENST00000608259 ZBTB22O15209 634 aa20.14■□□□□ 0.81
AC016542.1-201ENST00000608259 EHMT2Q96KQ7 1210 aa20.14■□□□□ 0.81
AC016542.1-201ENST00000608259 FOXD4L1Q9NU39 408 aa20.11■□□□□ 0.81
AC016542.1-201ENST00000608259 RNF39Q9H2S5 420 aa20.09■□□□□ 0.81
AC016542.1-201ENST00000608259 U3KPZ7 1027 aaPredicted RBP20.02■□□□□ 0.8
AC016542.1-201ENST00000608259 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
AC016542.1-201ENST00000608259 MYCNP04198 464 aaPredicted RBP19.86■□□□□ 0.77
AC016542.1-201ENST00000608259 C1QBPQ07021 282 aaKnown RBP19.83■□□□□ 0.77
AC016542.1-201ENST00000608259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
AC016542.1-201ENST00000608259 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
AC016542.1-201ENST00000608259 SAMD1Q6SPF0 538 aaPredicted RBP19.63■□□□□ 0.73
AC016542.1-201ENST00000608259 CACNB1Q02641 598 aaPredicted RBP19.61■□□□□ 0.73
AC016542.1-201ENST00000608259 SPINK5Q9NQ38 1064 aaPredicted RBP19.5■□□□□ 0.71
AC016542.1-201ENST00000608259 APLP2Q06481 763 aa19.49■□□□□ 0.71
AC016542.1-201ENST00000608259 ATXN8OSP0DMR3 200 aa19.41■□□□□ 0.7
AC016542.1-201ENST00000608259 CAPN15O75808 1086 aa19.4■□□□□ 0.7
AC016542.1-201ENST00000608259 ATF5Q9Y2D1 282 aaPredicted RBP19.4■□□□□ 0.7
AC016542.1-201ENST00000608259 TRHP20396 242 aaPredicted RBP19.3■□□□□ 0.68
AC016542.1-201ENST00000608259 ZNF219Q9P2Y4 722 aaPredicted RBP19.25■□□□□ 0.67
AC016542.1-201ENST00000608259 DSG3P32926 999 aa19.1■□□□□ 0.65
AC016542.1-201ENST00000608259 ABCB7O75027 752 aa19.05■□□□□ 0.64
AC016542.1-201ENST00000608259 POLA2Q14181 598 aa18.98■□□□□ 0.63
AC016542.1-201ENST00000608259 ZBTB12Q9Y330 459 aaPredicted RBP18.61■□□□□ 0.57
AC016542.1-201ENST00000608259 MKRN4PQ13434 485 aaPredicted RBP18.54■□□□□ 0.56
AC016542.1-201ENST00000608259 FBLN2P98095 1184 aa18.53■□□□□ 0.56
AC016542.1-201ENST00000608259 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
AC016542.1-201ENST00000608259 RBM42Q9BTD8 480 aaKnown RBP18.15■□□□□ 0.5
AC016542.1-201ENST00000608259 SPDYE2BA6NHP3 402 aa18.12■□□□□ 0.49
AC016542.1-201ENST00000608259 SPDYE6P0CI01 402 aa18.12■□□□□ 0.49
AC016542.1-201ENST00000608259 SPDYE2Q495Y8 402 aa18.12■□□□□ 0.49
AC016542.1-201ENST00000608259 SPDYE4A6NLX3 237 aa18.07■□□□□ 0.48
AC016542.1-201ENST00000608259 ZNF692Q9BU19 519 aaPredicted RBP18.06■□□□□ 0.48
AC016542.1-201ENST00000608259 FKBP8Q14318 412 aa18.03■□□□□ 0.48
AC016542.1-201ENST00000608259 SSUH2Q9Y2M2 353 aa17.99■□□□□ 0.47
AC016542.1-201ENST00000608259 AKT1S1Q96B36 256 aa17.94■□□□□ 0.46
AC016542.1-201ENST00000608259 POTEHQ6S545 545 aa17.85■□□□□ 0.45
AC016542.1-201ENST00000608259 PABPN1Q86U42 306 aaKnown RBP eCLIP17.82■□□□□ 0.44
AC016542.1-201ENST00000608259 REM2Q8IYK8 340 aaPredicted RBP17.8■□□□□ 0.44
AC016542.1-201ENST00000608259 PROM2Q8N271 834 aa17.76■□□□□ 0.43
AC016542.1-201ENST00000608259 SPDYE1Q8NFV5 336 aaPredicted RBP17.61■□□□□ 0.41
AC016542.1-201ENST00000608259 PITPNM1O00562 1244 aa17.59■□□□□ 0.41
AC016542.1-201ENST00000608259 CLEC11AQ9Y240 323 aa17.55■□□□□ 0.4
AC016542.1-201ENST00000608259 STAG3Q9UJ98 1225 aa17.48■□□□□ 0.39
AC016542.1-201ENST00000608259 CHRDL2Q6WN34 429 aa17.46■□□□□ 0.39
AC016542.1-201ENST00000608259 PRR29P0C7W0 189 aa17.37■□□□□ 0.37
AC016542.1-201ENST00000608259 FBXO3Q9UK99 471 aa17.37■□□□□ 0.37
AC016542.1-201ENST00000608259 FXR2P51116 673 aaKnown RBP eCLIP17.27■□□□□ 0.36
AC016542.1-201ENST00000608259 PIP4P2Q8N4L2 257 aa17.24■□□□□ 0.35
AC016542.1-201ENST00000608259 VASPP50552 380 aaPredicted RBP17.16■□□□□ 0.34
AC016542.1-201ENST00000608259 CREBZFQ9NS37 354 aa17.16■□□□□ 0.34
AC016542.1-201ENST00000608259 PRKAR2AP13861 404 aaKnown RBP17.15■□□□□ 0.34
AC016542.1-201ENST00000608259 CHADLQ6NUI6 762 aa17.15■□□□□ 0.34
AC016542.1-201ENST00000608259 MIER1Q8N108 512 aa17.15■□□□□ 0.34
AC016542.1-201ENST00000608259 PLCD3Q8N3E9 789 aa17.1■□□□□ 0.33
AC016542.1-201ENST00000608259 PLEKHG5O94827 1062 aa17.01■□□□□ 0.31
AC016542.1-201ENST00000608259 MNX1P50219 401 aaPredicted RBP16.98■□□□□ 0.31
AC016542.1-201ENST00000608259 FARP1Q9Y4F1 1045 aaPredicted RBP16.96■□□□□ 0.31
AC016542.1-201ENST00000608259 IFNLR1Q8IU57 520 aaPredicted RBP16.95■□□□□ 0.3
AC016542.1-201ENST00000608259 KLHL34Q8N239 644 aa16.89■□□□□ 0.29
AC016542.1-201ENST00000608259 ZBTB47Q9UFB7 747 aaPredicted RBP16.87■□□□□ 0.29
AC016542.1-201ENST00000608259 NPM1P06748 294 aaKnown RBP eCLIP16.84■□□□□ 0.29
AC016542.1-201ENST00000608259 SPOCK2Q92563 424 aa16.74■□□□□ 0.27
AC016542.1-201ENST00000608259 NUBP1P53384 320 aa16.73■□□□□ 0.27
AC016542.1-201ENST00000608259 HAX1O00165 279 aa16.7■□□□□ 0.26
AC016542.1-201ENST00000608259 C19orf67A6NJJ6 358 aa16.68■□□□□ 0.26
AC016542.1-201ENST00000608259 RASEFQ8IZ41 740 aa16.67■□□□□ 0.26
AC016542.1-201ENST00000608259 CD44P16070 742 aaKnown RBP16.64■□□□□ 0.25
AC016542.1-201ENST00000608259 EVX2Q03828 476 aa16.6■□□□□ 0.25
AC016542.1-201ENST00000608259 TSPYL2Q9H2G4 693 aaPredicted RBP16.59■□□□□ 0.25
AC016542.1-201ENST00000608259 PAK3O75914 559 aaPredicted RBP16.55■□□□□ 0.24
AC016542.1-201ENST00000608259 DCAF8Q5TAQ9 597 aa16.55■□□□□ 0.24
AC016542.1-201ENST00000608259 FAM212AQ96EL1 285 aa16.55■□□□□ 0.24
AC016542.1-201ENST00000608259 ZRANB1Q9UGI0 708 aa16.55■□□□□ 0.24
AC016542.1-201ENST00000608259 CIZ1Q9ULV3 898 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms