RNA–Protein interactions for RNA: ENST00000604542.1

LAPTM4BP2-201, Transcript of lysosomal protein transmembrane 4 beta pseudogene 2, humanhuman

BASIC

Gene LAPTM4BP2, Length 446 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BP2-201ENST00000604542 AEBP2Q6ZN18 517 aaPredicted RBP17.79■□□□□ 0.44
LAPTM4BP2-201ENST00000604542 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
LAPTM4BP2-201ENST00000604542 PHF23Q9BUL5 403 aaPredicted RBP15.09■□□□□ 0.01
LAPTM4BP2-201ENST00000604542 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
LAPTM4BP2-201ENST00000604542 NISCHQ9Y2I1 1504 aa14.29□□□□□ -0.12
LAPTM4BP2-201ENST00000604542 FOXD1Q16676 465 aa14.05□□□□□ -0.16
LAPTM4BP2-201ENST00000604542 PLPPR3Q6T4P5 718 aa13.76□□□□□ -0.21
LAPTM4BP2-201ENST00000604542 PPP6R1Q9UPN7 881 aa13.39□□□□□ -0.27
LAPTM4BP2-201ENST00000604542 ADRA2BP18089 450 aa13.33□□□□□ -0.28
LAPTM4BP2-201ENST00000604542 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
LAPTM4BP2-201ENST00000604542 MSH5O43196 834 aa12.97□□□□□ -0.33
LAPTM4BP2-201ENST00000604542 POTEDQ86YR6 584 aa12.89□□□□□ -0.35
LAPTM4BP2-201ENST00000604542 CCDC180Q9P1Z9 1646 aa12.49□□□□□ -0.41
LAPTM4BP2-201ENST00000604542 MAPK8IP2Q13387 824 aaPredicted RBP12.19□□□□□ -0.46
LAPTM4BP2-201ENST00000604542 PPP4R3CPQ6ZMV5 832 aa12.13□□□□□ -0.47
LAPTM4BP2-201ENST00000604542 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
LAPTM4BP2-201ENST00000604542 ZCCHC6Q5VYS8 1495 aaKnown RBP12.03□□□□□ -0.48
LAPTM4BP2-201ENST00000604542 DMRT2Q9Y5R5 561 aa12□□□□□ -0.49
LAPTM4BP2-201ENST00000604542 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
LAPTM4BP2-201ENST00000604542 SHROOM4Q9ULL8 1493 aa11.85□□□□□ -0.51
LAPTM4BP2-201ENST00000604542 ABCC9O60706 1549 aa11.83□□□□□ -0.52
LAPTM4BP2-201ENST00000604542 CNKSR2Q8WXI2 1034 aa11.82□□□□□ -0.52
LAPTM4BP2-201ENST00000604542 DCAF1Q9Y4B6 1507 aa11.75□□□□□ -0.53
LAPTM4BP2-201ENST00000604542 HOXD11P31277 338 aaPredicted RBP11.69□□□□□ -0.54
LAPTM4BP2-201ENST00000604542 NCBP3Q53F19 620 aaKnown RBP11.69□□□□□ -0.54
LAPTM4BP2-201ENST00000604542 RNF216Q9NWF9 866 aaPredicted RBP11.65□□□□□ -0.54
LAPTM4BP2-201ENST00000604542 KCNA4P22459 653 aa11.62□□□□□ -0.55
LAPTM4BP2-201ENST00000604542 SCRIBQ14160 1630 aa11.6□□□□□ -0.55
LAPTM4BP2-201ENST00000604542 NPM3O75607 178 aaKnown RBP11.59□□□□□ -0.55
LAPTM4BP2-201ENST00000604542 NACADO15069 1562 aa11.57□□□□□ -0.56
LAPTM4BP2-201ENST00000604542 MYO15BQ96JP2 1530 aa11.55□□□□□ -0.56
LAPTM4BP2-201ENST00000604542 RB1CC1Q8TDY2 1594 aa11.51□□□□□ -0.57
LAPTM4BP2-201ENST00000604542 DCAF8L1A6NGE4 600 aa11.43□□□□□ -0.58
LAPTM4BP2-201ENST00000604542 SUPT5HO00267 1087 aaKnown RBP11.36□□□□□ -0.59
LAPTM4BP2-201ENST00000604542 UNC13AQ9UPW8 1703 aa11.35□□□□□ -0.59
LAPTM4BP2-201ENST00000604542 DNAJC5BQ9UF47 199 aa11.3□□□□□ -0.6
LAPTM4BP2-201ENST00000604542 BICRAQ9NZM4 1560 aa11.15□□□□□ -0.62
LAPTM4BP2-201ENST00000604542 CECR2Q9BXF3 1484 aa11.14□□□□□ -0.63
LAPTM4BP2-201ENST00000604542 PABPN1Q86U42 306 aaKnown RBP eCLIP11.14□□□□□ -0.63
LAPTM4BP2-201ENST00000604542 RNF39Q9H2S5 420 aa11.14□□□□□ -0.63
LAPTM4BP2-201ENST00000604542 RSF1Q96T23 1441 aaPredicted RBP11.09□□□□□ -0.63
LAPTM4BP2-201ENST00000604542 MROH2BQ7Z745 1585 aa11.08□□□□□ -0.64
LAPTM4BP2-201ENST00000604542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.64
LAPTM4BP2-201ENST00000604542 WIZO95785 1651 aa11.05□□□□□ -0.64
LAPTM4BP2-201ENST00000604542 BAZ1AQ9NRL2 1556 aaPredicted RBP11.05□□□□□ -0.64
LAPTM4BP2-201ENST00000604542 SMARCA4P51532 1647 aa11.04□□□□□ -0.64
LAPTM4BP2-201ENST00000604542 SLC4A2P04920 1241 aa11.03□□□□□ -0.64
LAPTM4BP2-201ENST00000604542 SLC4A1APQ9BWU0 796 aaKnown RBP11.02□□□□□ -0.65
LAPTM4BP2-201ENST00000604542 CACNB1Q02641 598 aaPredicted RBP10.96□□□□□ -0.65
LAPTM4BP2-201ENST00000604542 C1QBPQ07021 282 aaKnown RBP10.96□□□□□ -0.65
LAPTM4BP2-201ENST00000604542 U3KPZ7 1027 aaPredicted RBP10.92□□□□□ -0.66
LAPTM4BP2-201ENST00000604542 TOP2AP11388 1531 aaKnown RBP10.89□□□□□ -0.67
LAPTM4BP2-201ENST00000604542 EIF4G1Q04637 1599 aaKnown RBP10.82□□□□□ -0.68
LAPTM4BP2-201ENST00000604542 SMARCA2P51531 1590 aa10.81□□□□□ -0.68
LAPTM4BP2-201ENST00000604542 PEG3Q9GZU2 1588 aa10.8□□□□□ -0.68
LAPTM4BP2-201ENST00000604542 BAZ1BQ9UIG0 1483 aaKnown RBP10.79□□□□□ -0.68
LAPTM4BP2-201ENST00000604542 ATAD2BQ9ULI0 1458 aa10.79□□□□□ -0.68
LAPTM4BP2-201ENST00000604542 CCDC88BA6NC98 1476 aa10.75□□□□□ -0.69
LAPTM4BP2-201ENST00000604542 ZBTB22O15209 634 aa10.72□□□□□ -0.69
LAPTM4BP2-201ENST00000604542 FOXD4L1Q9NU39 408 aa10.71□□□□□ -0.69
LAPTM4BP2-201ENST00000604542 EHMT2Q96KQ7 1210 aa10.7□□□□□ -0.7
LAPTM4BP2-201ENST00000604542 SPINK5Q9NQ38 1064 aaPredicted RBP10.69□□□□□ -0.7
LAPTM4BP2-201ENST00000604542 HMGXB3Q12766 1538 aa10.68□□□□□ -0.7
LAPTM4BP2-201ENST00000604542 CC2D2AQ9P2K1 1620 aa10.68□□□□□ -0.7
LAPTM4BP2-201ENST00000604542 MYCNP04198 464 aaPredicted RBP10.66□□□□□ -0.7
LAPTM4BP2-201ENST00000604542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.63□□□□□ -0.71
LAPTM4BP2-201ENST00000604542 HNRNPUL2Q1KMD3 747 aaKnown RBP10.63□□□□□ -0.71
LAPTM4BP2-201ENST00000604542 ABCC8Q09428 1581 aa10.63□□□□□ -0.71
LAPTM4BP2-201ENST00000604542 NCAPD3P42695 1498 aa10.62□□□□□ -0.71
LAPTM4BP2-201ENST00000604542 TRIM41Q8WV44 630 aa10.61□□□□□ -0.71
LAPTM4BP2-201ENST00000604542 CSRNP3Q8WYN3 585 aa10.61□□□□□ -0.71
LAPTM4BP2-201ENST00000604542 CAPN15O75808 1086 aa10.6□□□□□ -0.71
LAPTM4BP2-201ENST00000604542 SAMD1Q6SPF0 538 aaPredicted RBP10.6□□□□□ -0.71
LAPTM4BP2-201ENST00000604542 APLP2Q06481 763 aa10.54□□□□□ -0.72
LAPTM4BP2-201ENST00000604542 DSG3P32926 999 aa10.53□□□□□ -0.72
LAPTM4BP2-201ENST00000604542 FAM9AQ8IZU1 332 aaPredicted RBP10.53□□□□□ -0.72
LAPTM4BP2-201ENST00000604542 PRDM2Q13029 1718 aa10.52□□□□□ -0.73
LAPTM4BP2-201ENST00000604542 TRHP20396 242 aaPredicted RBP10.51□□□□□ -0.73
LAPTM4BP2-201ENST00000604542 SYNJ1O43426 1573 aa10.49□□□□□ -0.73
LAPTM4BP2-201ENST00000604542 ATF5Q9Y2D1 282 aaPredicted RBP10.49□□□□□ -0.73
LAPTM4BP2-201ENST00000604542 WRNQ14191 1432 aaPredicted RBP eCLIP10.48□□□□□ -0.73
LAPTM4BP2-201ENST00000604542 ZNF219Q9P2Y4 722 aaPredicted RBP10.47□□□□□ -0.73
LAPTM4BP2-201ENST00000604542 LOC105371045A0A1W2PR82 267 aa10.44□□□□□ -0.74
LAPTM4BP2-201ENST00000604542 CFTRP13569 1480 aa10.42□□□□□ -0.74
LAPTM4BP2-201ENST00000604542 BIVM-ERCC5R4GMW8 1640 aa10.41□□□□□ -0.74
LAPTM4BP2-201ENST00000604542 ABCB7O75027 752 aa10.41□□□□□ -0.74
LAPTM4BP2-201ENST00000604542 TOP2BQ02880 1626 aa10.4□□□□□ -0.75
LAPTM4BP2-201ENST00000604542 NESP48681 1621 aa10.39□□□□□ -0.75
LAPTM4BP2-201ENST00000604542 CADPSQ9ULU8 1353 aa10.39□□□□□ -0.75
LAPTM4BP2-201ENST00000604542 CUX1P39880 1505 aa10.38□□□□□ -0.75
LAPTM4BP2-201ENST00000604542 SOGA1O94964 1423 aa10.37□□□□□ -0.75
LAPTM4BP2-201ENST00000604542 ATXN8OSP0DMR3 200 aa10.36□□□□□ -0.75
LAPTM4BP2-201ENST00000604542 RUSC2Q8N2Y8 1516 aa10.35□□□□□ -0.75
LAPTM4BP2-201ENST00000604542 FANCD2Q9BXW9 1451 aa10.34□□□□□ -0.75
LAPTM4BP2-201ENST00000604542 LAMC3Q9Y6N6 1575 aa10.33□□□□□ -0.76
LAPTM4BP2-201ENST00000604542 POLA2Q14181 598 aa10.32□□□□□ -0.76
LAPTM4BP2-201ENST00000604542 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
LAPTM4BP2-201ENST00000604542 EEA1Q15075 1411 aa10.3□□□□□ -0.76
LAPTM4BP2-201ENST00000604542 CEP164Q9UPV0 1460 aa10.3□□□□□ -0.76
LAPTM4BP2-201ENST00000604542 DNMBPQ6XZF7 1577 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms