RNA–Protein interactions for RNA: ENST00000544974.6

LRRC49-204, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2 BASIC

Gene LRRC49, Length 6,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-204ENST00000544974 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
LRRC49-204ENST00000544974 DCAF8L2P0C7V8 631 aa10.44□□□□□ -0.74
LRRC49-204ENST00000544974 MYT1Q01538 1121 aa10.33□□□□□ -0.76
LRRC49-204ENST00000544974 ERICH6Q7L0X2 663 aa10.28□□□□□ -0.76
LRRC49-204ENST00000544974 EHMT2Q96KQ7 1210 aa9.96□□□□□ -0.82
LRRC49-204ENST00000544974 CCER1Q8TC90 406 aaPredicted RBP9.95□□□□□ -0.82
LRRC49-204ENST00000544974 TTBK1Q5TCY1 1321 aaPredicted RBP9.77□□□□□ -0.85
LRRC49-204ENST00000544974 YTHDC1Q96MU7 727 aaKnown RBP9.73□□□□□ -0.85
LRRC49-204ENST00000544974 SUPT5HO00267 1087 aaKnown RBP9.63□□□□□ -0.87
LRRC49-204ENST00000544974 DAXXQ9UER7 740 aaPredicted RBP9.59□□□□□ -0.87
LRRC49-204ENST00000544974 APLP2Q06481 763 aa9.55□□□□□ -0.88
LRRC49-204ENST00000544974 CENPBP07199 599 aaPredicted RBP9.54□□□□□ -0.88
LRRC49-204ENST00000544974 FAM9AQ8IZU1 332 aaPredicted RBP9.49□□□□□ -0.89
LRRC49-204ENST00000544974 NEFLP07196 543 aa9.48□□□□□ -0.89
LRRC49-204ENST00000544974 RANGAP1P46060 587 aaPredicted RBP9.43□□□□□ -0.9
LRRC49-204ENST00000544974 ATP1B4Q9UN42 357 aaPredicted RBP9.41□□□□□ -0.9
LRRC49-204ENST00000544974 ZNF316A6NFI3 1004 aaPredicted RBP9.32□□□□□ -0.92
LRRC49-204ENST00000544974 SHROOM4Q9ULL8 1493 aa9.31□□□□□ -0.92
LRRC49-204ENST00000544974 PCGF6Q9BYE7 350 aa9.29□□□□□ -0.92
LRRC49-204ENST00000544974 RTL5Q5HYW3 569 aaPredicted RBP9.27□□□□□ -0.93
LRRC49-204ENST00000544974 CHIC1Q5VXU3 224 aa9.24□□□□□ -0.93
LRRC49-204ENST00000544974 MYT1LQ9UL68 1186 aa9.22□□□□□ -0.93
LRRC49-204ENST00000544974 CNGB1Q14028 1251 aaPredicted RBP9.19□□□□□ -0.94
LRRC49-204ENST00000544974 CLSPNQ9HAW4 1339 aa9.19□□□□□ -0.94
LRRC49-204ENST00000544974 POLR3GLQ9BT43 218 aa9.19□□□□□ -0.94
LRRC49-204ENST00000544974 EIF5BO60841 1220 aaKnown RBP9.15□□□□□ -0.94
LRRC49-204ENST00000544974 GLIPR1L2Q4G1C9 344 aa9.15□□□□□ -0.95
LRRC49-204ENST00000544974 SLC4A1APQ9BWU0 796 aaKnown RBP9.14□□□□□ -0.95
LRRC49-204ENST00000544974 BCL11AQ9H165 835 aa9.12□□□□□ -0.95
LRRC49-204ENST00000544974 ZEB1P37275 1124 aaPredicted RBP9.08□□□□□ -0.96
LRRC49-204ENST00000544974 SLC24A1O60721 1099 aa8.97□□□□□ -0.97
LRRC49-204ENST00000544974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.95□□□□□ -0.98
LRRC49-204ENST00000544974 HNRNPUL2Q1KMD3 747 aaKnown RBP8.95□□□□□ -0.98
LRRC49-204ENST00000544974 UBTFP17480 764 aaKnown RBP8.92□□□□□ -0.98
LRRC49-204ENST00000544974 PPARGC1BQ86YN6 1023 aaKnown RBP8.92□□□□□ -0.98
LRRC49-204ENST00000544974 ZBTB47Q9UFB7 747 aaPredicted RBP8.9□□□□□ -0.98
LRRC49-204ENST00000544974 ITGAEP38570 1179 aa8.9□□□□□ -0.98
LRRC49-204ENST00000544974 AMER1Q5JTC6 1135 aaPredicted RBP8.9□□□□□ -0.99
LRRC49-204ENST00000544974 CDK11BP21127 795 aaKnown RBP8.84□□□□□ -0.99
LRRC49-204ENST00000544974 CDK11AQ9UQ88 783 aaPredicted RBP8.84□□□□□ -0.99
LRRC49-204ENST00000544974 NCBP3Q53F19 620 aaKnown RBP8.82□□□□□ -1
LRRC49-204ENST00000544974 ANP32BQ92688 251 aaKnown RBP8.82□□□□□ -1
LRRC49-204ENST00000544974 BCANQ96GW7 911 aa8.82□□□□□ -1
LRRC49-204ENST00000544974 ARXQ96QS3 562 aa8.81□□□□□ -1
LRRC49-204ENST00000544974 TULP1O00294 542 aaPredicted RBP8.78□□□□□ -1
LRRC49-204ENST00000544974 TRIM41Q8WV44 630 aa8.77□□□□□ -1.01
LRRC49-204ENST00000544974 NPM2Q86SE8 214 aaKnown RBP8.75□□□□□ -1.01
LRRC49-204ENST00000544974 TNNT2P45379 298 aaPredicted RBP8.73□□□□□ -1.01
LRRC49-204ENST00000544974 CANXP27824 592 aaKnown RBP8.71□□□□□ -1.01
LRRC49-204ENST00000544974 HSP90AA1P07900 732 aaKnown RBP8.69□□□□□ -1.02
LRRC49-204ENST00000544974 NISCHQ9Y2I1 1504 aa8.68□□□□□ -1.02
LRRC49-204ENST00000544974 PLPPR3Q6T4P5 718 aa8.64□□□□□ -1.03
LRRC49-204ENST00000544974 ANP32AP39687 249 aaKnown RBP8.61□□□□□ -1.03
LRRC49-204ENST00000544974 ZNF326Q5BKZ1 582 aaKnown RBP8.59□□□□□ -1.03
LRRC49-204ENST00000544974 NBR1Q14596 966 aa8.59□□□□□ -1.03
LRRC49-204ENST00000544974 TRIM44Q96DX7 344 aaPredicted RBP8.57□□□□□ -1.04
LRRC49-204ENST00000544974 TRIM52Q96A61 297 aa8.56□□□□□ -1.04
LRRC49-204ENST00000544974 A0A0G2JS52 829 aa8.56□□□□□ -1.04
LRRC49-204ENST00000544974 PRM3Q9NNZ6 103 aa8.56□□□□□ -1.04
LRRC49-204ENST00000544974 TPRNQ4KMQ1 711 aa8.54□□□□□ -1.04
LRRC49-204ENST00000544974 NEFMP07197 916 aa8.54□□□□□ -1.04
LRRC49-204ENST00000544974 NEUROD1Q13562 356 aa8.52□□□□□ -1.05
LRRC49-204ENST00000544974 FAM50AQ14320 339 aaKnown RBP8.51□□□□□ -1.05
LRRC49-204ENST00000544974 NCLP19338 710 aaKnown RBP8.5□□□□□ -1.05
LRRC49-204ENST00000544974 SCAF1Q9H7N4 1312 aaKnown RBP8.5□□□□□ -1.05
LRRC49-204ENST00000544974 DNTTIP2Q5QJE6 756 aaKnown RBP8.49□□□□□ -1.05
LRRC49-204ENST00000544974 CALRP27797 417 aaKnown RBP8.49□□□□□ -1.05
LRRC49-204ENST00000544974 HRCP23327 699 aa8.48□□□□□ -1.05
LRRC49-204ENST00000544974 FBXO3Q9UK99 471 aa8.47□□□□□ -1.05
LRRC49-204ENST00000544974 CLSTN1O94985 981 aa8.46□□□□□ -1.06
LRRC49-204ENST00000544974 TAOK2Q9UL54 1235 aa8.46□□□□□ -1.06
LRRC49-204ENST00000544974 PLEKHG5O94827 1062 aa8.45□□□□□ -1.06
LRRC49-204ENST00000544974 DIEXFQ68CQ4 756 aaKnown RBP8.45□□□□□ -1.06
LRRC49-204ENST00000544974 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
LRRC49-204ENST00000544974 UPF2Q9HAU5 1272 aaKnown RBP8.43□□□□□ -1.06
LRRC49-204ENST00000544974 NAP1L5Q96NT1 182 aaPredicted RBP8.43□□□□□ -1.06
LRRC49-204ENST00000544974 PTMAP06454 111 aaKnown RBP8.43□□□□□ -1.06
LRRC49-204ENST00000544974 RTN4Q9NQC3 1192 aaKnown RBP8.41□□□□□ -1.06
LRRC49-204ENST00000544974 TRIM26Q12899 539 aaPredicted RBP8.4□□□□□ -1.07
LRRC49-204ENST00000544974 ZBTB7CA1YPR0 619 aa8.39□□□□□ -1.07
LRRC49-204ENST00000544974 FBLN2P98095 1184 aa8.38□□□□□ -1.07
LRRC49-204ENST00000544974 ANP32CO43423 234 aa8.38□□□□□ -1.07
LRRC49-204ENST00000544974 ARID4BQ4LE39 1312 aaPredicted RBP8.37□□□□□ -1.07
LRRC49-204ENST00000544974 PDE4CQ08493 712 aa8.37□□□□□ -1.07
LRRC49-204ENST00000544974 ESF1Q9H501 851 aaKnown RBP8.37□□□□□ -1.07
LRRC49-204ENST00000544974 ZRSR1Q15695 479 aaKnown RBP8.37□□□□□ -1.07
LRRC49-204ENST00000544974 ARID3AQ99856 593 aa8.36□□□□□ -1.07
LRRC49-204ENST00000544974 STAG3Q9UJ98 1225 aa8.36□□□□□ -1.07
LRRC49-204ENST00000544974 PLCB2Q00722 1185 aa8.35□□□□□ -1.07
LRRC49-204ENST00000544974 TNNT3P45378 269 aaPredicted RBP8.34□□□□□ -1.07
LRRC49-204ENST00000544974 CHGAP10645 457 aaKnown RBP8.34□□□□□ -1.07
LRRC49-204ENST00000544974 ARID3CA6NKF2 412 aa8.34□□□□□ -1.07
LRRC49-204ENST00000544974 ANO8Q9HCE9 1232 aaPredicted RBP8.34□□□□□ -1.07
LRRC49-204ENST00000544974 APPP05067 770 aa8.33□□□□□ -1.08
LRRC49-204ENST00000544974 ERICH6BQ5W0A0 696 aa8.32□□□□□ -1.08
LRRC49-204ENST00000544974 SALL2Q9Y467 1007 aaPredicted RBP8.32□□□□□ -1.08
LRRC49-204ENST00000544974 ANP32EQ9BTT0 268 aa8.31□□□□□ -1.08
LRRC49-204ENST00000544974 SENP3Q9H4L4 574 aaPredicted RBP8.31□□□□□ -1.08
LRRC49-204ENST00000544974 NOC3LQ8WTT2 800 aaKnown RBP8.31□□□□□ -1.08
LRRC49-204ENST00000544974 KRI1Q8N9T8 703 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms