Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 TSPY7P-201ENST00000431358 1114 ntBASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDHB1Q9Y5F3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 KRT18P21-201ENST00000515767 1272 ntBASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 BX088651.1-201ENST00000540551 451 ntBASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB1Q9Y5F3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 PCDHAC2-203ENST00000615316 3011 ntBASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 AC233702.5-201ENST00000584107 538 ntBASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB1Q9Y5F3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 AL390719.1-204ENST00000412397 1219 ntBASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 AC012618.2-201ENST00000428058 849 ntBASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB1Q9Y5F3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms