Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 AC092118.2-201ENST00000613495 667 ntBASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 AC138932.1-201ENST00000534164 6830 ntBASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 AC008694.1-202ENST00000636953 945 ntBASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 RBM17P2-201ENST00000616397 1405 ntBASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 AC009237.14-201ENST00000609975 1594 ntBASIC15.74■□□□□ 0.11
LSM4Q9Y4Z0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 AC069236.1-201ENST00000604339 616 ntBASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSM4Q9Y4Z0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 AC093787.1-201ENST00000450396 207 ntBASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LSM4Q9Y4Z0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms