Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.57■□□□□ 0.4
SSR3Q9UNL2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR3Q9UNL2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.56■□□□□ 0.4
SSR3Q9UNL2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 FAM21FP-204ENST00000608637 956 ntBASIC17.56■□□□□ 0.4
SSR3Q9UNL2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR3Q9UNL2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SSR3Q9UNL2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR3Q9UNL2 AL390961.4-201ENST00000623958 2535 ntBASIC17.54■□□□□ 0.4
SSR3Q9UNL2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms