Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 AC098590.1-201ENST00000468126 897 ntBASIC21.19■□□□□ 0.98
NXF1Q9UBU9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.19■□□□□ 0.98
NXF1Q9UBU9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.19■□□□□ 0.98
NXF1Q9UBU9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 KRASP1-201ENST00000407852 552 ntBASIC21.18■□□□□ 0.98
NXF1Q9UBU9 AC239809.2-201ENST00000415381 517 ntBASIC21.18■□□□□ 0.98
NXF1Q9UBU9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 AL158047.1-201ENST00000445918 881 ntBASIC21.18■□□□□ 0.98
NXF1Q9UBU9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 AC142381.4-202ENST00000563973 229 ntBASIC21.18■□□□□ 0.98
NXF1Q9UBU9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 AP001271.2-201ENST00000624018 1556 ntBASIC21.18■□□□□ 0.98
NXF1Q9UBU9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NXF1Q9UBU9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 RPPH1-201ENST00000516869 333 ntBASIC21.17■□□□□ 0.98
NXF1Q9UBU9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NXF1Q9UBU9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NXF1Q9UBU9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.15■□□□□ 0.98
NXF1Q9UBU9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms