Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.14■□□□□ 0.49
UBQLN4Q9NRR5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 POM121L13P-201ENST00000422362 380 ntBASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 AP003097.1-201ENST00000530657 1135 ntBASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 AL121829.2-201ENST00000620908 328 ntBASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN4Q9NRR5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 AC125437.2-201ENST00000625180 2167 ntBASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
UBQLN4Q9NRR5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 AC026366.1-201ENST00000488803 879 ntBASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 AC008403.3-201ENST00000598924 454 ntBASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN4Q9NRR5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBQLN4Q9NRR5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms