Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB16Q9NRJ7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB16Q9NRJ7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB16Q9NRJ7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHB16Q9NRJ7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB16Q9NRJ7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB16Q9NRJ7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHB16Q9NRJ7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 MIR935-201ENST00000401179 91 ntBASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 AC010536.3-201ENST00000620306 533 ntBASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 FZD10-202ENST00000539839 3282 ntBASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 AC004408.2-201ENST00000623613 2777 ntBASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB16Q9NRJ7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 AC007322.4-201ENST00000509611 723 ntBASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 AC013268.1-206ENST00000638368 961 ntBASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 AC112229.1-201ENST00000639295 961 ntBASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHB16Q9NRJ7 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 AC100791.3-201ENST00000617619 330 ntBASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB16Q9NRJ7 CYP21A1P-202ENST00000354927 1481 ntBASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms