Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3FQ9H1D9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3FQ9H1D9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3FQ9H1D9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
POLR3FQ9H1D9 HTR7P1-201ENST00000538670 1336 ntBASIC21.76■■□□□ 1.07
POLR3FQ9H1D9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
POLR3FQ9H1D9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3FQ9H1D9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 MIR718-201ENST00000390190 70 ntBASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 RPS2P55-201ENST00000397318 883 ntBASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 AC107956.1-201ENST00000494359 873 ntBASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
POLR3FQ9H1D9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.74■■□□□ 1.07
POLR3FQ9H1D9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3FQ9H1D9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
POLR3FQ9H1D9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
POLR3FQ9H1D9 AC012618.2-201ENST00000428058 849 ntBASIC21.74■■□□□ 1.07
POLR3FQ9H1D9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.74■■□□□ 1.07
POLR3FQ9H1D9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.74■■□□□ 1.07
POLR3FQ9H1D9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
POLR3FQ9H1D9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3FQ9H1D9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
POLR3FQ9H1D9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 AC233702.5-201ENST00000584107 538 ntBASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
POLR3FQ9H1D9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 AL596275.1-201ENST00000423464 877 ntBASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 KRT18P16-201ENST00000510337 1294 ntBASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 AL135905.2-201ENST00000584934 1404 ntBASIC21.72■■□□□ 1.07
POLR3FQ9H1D9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 AC009237.14-201ENST00000609975 1594 ntBASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3FQ9H1D9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms