Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX47Q9H0S4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
DDX47Q9H0S4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.52■□□□□ 0.88
DDX47Q9H0S4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX47Q9H0S4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX47Q9H0S4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
DDX47Q9H0S4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX47Q9H0S4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDX47Q9H0S4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX47Q9H0S4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX47Q9H0S4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX47Q9H0S4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX47Q9H0S4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.87
DDX47Q9H0S4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
DDX47Q9H0S4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.51■□□□□ 0.87
DDX47Q9H0S4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX47Q9H0S4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 MIR638-201ENST00000385237 100 ntBASIC20.5■□□□□ 0.87
DDX47Q9H0S4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX47Q9H0S4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 AL162412.1-201ENST00000567129 965 ntBASIC20.49■□□□□ 0.87
DDX47Q9H0S4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX47Q9H0S4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.48■□□□□ 0.87
DDX47Q9H0S4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms