Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 AC069236.1-201ENST00000604339 616 ntBASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 OR10C1-204ENST00000622521 1039 ntBASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXP3Q9BZS1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 AL162412.1-201ENST00000567129 965 ntBASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 AL591742.1-201ENST00000604433 565 ntBASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXP3Q9BZS1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 AL031963.3-201ENST00000606441 850 ntBASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXP3Q9BZS1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 BX276092.2-201ENST00000417668 665 ntBASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXP3Q9BZS1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms