Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 MFSD11-216ENST00000590393 1141 ntBASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 CYP21A1P-202ENST00000354927 1481 ntBASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 KRT8P17-201ENST00000453110 1448 ntBASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD3Q9BV44 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 AC011767.1-201ENST00000617410 1153 ntBASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
THUMPD3Q9BV44 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 KRT16P6-202ENST00000425692 1426 ntBASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 BID-214ENST00000617586 542 ntTSL 5 BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 AC090340.1-201ENST00000620778 4980 ntBASIC18.78■□□□□ 0.6
THUMPD3Q9BV44 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THUMPD3Q9BV44 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.77■□□□□ 0.6
THUMPD3Q9BV44 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THUMPD3Q9BV44 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
THUMPD3Q9BV44 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
THUMPD3Q9BV44 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.77■□□□□ 0.6
THUMPD3Q9BV44 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.77■□□□□ 0.6
THUMPD3Q9BV44 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms