Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H4Q96RI1 WIZP1-201ENST00000531444 2299 ntBASIC18.54■□□□□ 0.56
NR1H4Q96RI1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.54■□□□□ 0.56
NR1H4Q96RI1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H4Q96RI1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H4Q96RI1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H4Q96RI1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.52■□□□□ 0.56
NR1H4Q96RI1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
NR1H4Q96RI1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H4Q96RI1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H4Q96RI1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NR1H4Q96RI1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.52■□□□□ 0.56
NR1H4Q96RI1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NR1H4Q96RI1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H4Q96RI1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
NR1H4Q96RI1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.52■□□□□ 0.56
NR1H4Q96RI1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H4Q96RI1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NR1H4Q96RI1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NR1H4Q96RI1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NR1H4Q96RI1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
NR1H4Q96RI1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
NR1H4Q96RI1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.52■□□□□ 0.55
NR1H4Q96RI1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NR1H4Q96RI1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 AC006333.2-201ENST00000607957 2099 ntBASIC18.51■□□□□ 0.55
NR1H4Q96RI1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 AL035685.1-201ENST00000636663 812 ntBASIC18.51■□□□□ 0.55
NR1H4Q96RI1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms