Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC46A1Q96NT5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 AL031985.4-201ENST00000642138 673 ntBASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SLC46A1Q96NT5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 PTBP1P-201ENST00000554374 1601 ntBASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC46A1Q96NT5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 FSCN1P1-201ENST00000568912 1481 ntBASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 KRT8P20-201ENST00000423953 1409 ntBASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 LIN28AP1-201ENST00000429574 405 ntBASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 AC087388.1-201ENST00000571370 1112 ntBASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC46A1Q96NT5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 AC010203.1-204ENST00000548782 407 ntBASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC46A1Q96NT5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
SLC46A1Q96NT5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC46A1Q96NT5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC46A1Q96NT5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC46A1Q96NT5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC46A1Q96NT5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC46A1Q96NT5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC46A1Q96NT5 AC092720.2-201ENST00000602388 1665 ntBASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms