Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHDQ96IW2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHDQ96IW2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHDQ96IW2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHDQ96IW2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHDQ96IW2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHDQ96IW2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.97■□□□□ 0.79
SHDQ96IW2 AC026396.1-201ENST00000419388 421 ntBASIC19.97■□□□□ 0.79
SHDQ96IW2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
SHDQ96IW2 AC008040.2-201ENST00000461049 708 ntBASIC19.97■□□□□ 0.79
SHDQ96IW2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
SHDQ96IW2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHDQ96IW2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.97■□□□□ 0.79
SHDQ96IW2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.97■□□□□ 0.79
SHDQ96IW2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.97■□□□□ 0.79
SHDQ96IW2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.97■□□□□ 0.79
SHDQ96IW2 HLA-A-209ENST00000638375 975 ntBASIC19.97■□□□□ 0.79
SHDQ96IW2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.97■□□□□ 0.79
SHDQ96IW2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHDQ96IW2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.97■□□□□ 0.79
SHDQ96IW2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SHDQ96IW2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHDQ96IW2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.97■□□□□ 0.79
SHDQ96IW2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.97■□□□□ 0.79
SHDQ96IW2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SHDQ96IW2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHDQ96IW2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.96■□□□□ 0.79
SHDQ96IW2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.96■□□□□ 0.79
SHDQ96IW2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.96■□□□□ 0.79
SHDQ96IW2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.96■□□□□ 0.79
SHDQ96IW2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SHDQ96IW2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 AL671277.2-201ENST00000458060 996 ntBASIC19.96■□□□□ 0.79
SHDQ96IW2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SHDQ96IW2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SHDQ96IW2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SHDQ96IW2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.96■□□□□ 0.79
SHDQ96IW2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.96■□□□□ 0.79
SHDQ96IW2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHDQ96IW2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SHDQ96IW2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
SHDQ96IW2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHDQ96IW2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.95■□□□□ 0.78
SHDQ96IW2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHDQ96IW2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.95■□□□□ 0.78
SHDQ96IW2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHDQ96IW2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHDQ96IW2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHDQ96IW2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.95■□□□□ 0.78
SHDQ96IW2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.95■□□□□ 0.78
SHDQ96IW2 AL353719.1-201ENST00000566847 864 ntBASIC19.95■□□□□ 0.78
SHDQ96IW2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.95■□□□□ 0.78
SHDQ96IW2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.95■□□□□ 0.78
SHDQ96IW2 AL023803.3-201ENST00000615559 522 ntBASIC19.95■□□□□ 0.78
SHDQ96IW2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
SHDQ96IW2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHDQ96IW2 ECEL1P1-201ENST00000373592 1742 ntBASIC19.95■□□□□ 0.78
SHDQ96IW2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SHDQ96IW2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
SHDQ96IW2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHDQ96IW2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHDQ96IW2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHDQ96IW2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHDQ96IW2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.95■□□□□ 0.78
SHDQ96IW2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.94■□□□□ 0.78
SHDQ96IW2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHDQ96IW2 AC233723.2-201ENST00000623798 2106 ntBASIC19.94■□□□□ 0.78
SHDQ96IW2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHDQ96IW2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.94■□□□□ 0.78
SHDQ96IW2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.94■□□□□ 0.78
SHDQ96IW2 Z98882.1-201ENST00000622160 2253 ntBASIC19.94■□□□□ 0.78
SHDQ96IW2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
SHDQ96IW2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHDQ96IW2 DUSP5P1-201ENST00000441325 1139 ntBASIC19.94■□□□□ 0.78
SHDQ96IW2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.94■□□□□ 0.78
SHDQ96IW2 AL691432.3-201ENST00000621860 400 ntBASIC19.94■□□□□ 0.78
SHDQ96IW2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.94■□□□□ 0.78
SHDQ96IW2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHDQ96IW2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.94■□□□□ 0.78
SHDQ96IW2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.94■□□□□ 0.78
SHDQ96IW2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.94■□□□□ 0.78
SHDQ96IW2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SHDQ96IW2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHDQ96IW2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHDQ96IW2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms