Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDCA5Q96FF9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CDCA5Q96FF9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CDCA5Q96FF9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.19■■□□□ 1.3
CDCA5Q96FF9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDCA5Q96FF9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDCA5Q96FF9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDCA5Q96FF9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CDCA5Q96FF9 KRT18P38-201ENST00000449496 1282 ntBASIC23.19■■□□□ 1.3
CDCA5Q96FF9 AL353719.1-201ENST00000566847 864 ntBASIC23.19■■□□□ 1.3
CDCA5Q96FF9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDCA5Q96FF9 AC140113.3-201ENST00000605663 199 ntBASIC23.19■■□□□ 1.3
CDCA5Q96FF9 AC069148.1-201ENST00000608741 768 ntBASIC23.19■■□□□ 1.3
CDCA5Q96FF9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDCA5Q96FF9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDCA5Q96FF9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDCA5Q96FF9 DPP3P2-201ENST00000416030 1696 ntBASIC23.19■■□□□ 1.3
CDCA5Q96FF9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDCA5Q96FF9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 KRT16P6-202ENST00000425692 1426 ntBASIC23.18■■□□□ 1.3
CDCA5Q96FF9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 Z85996.1-201ENST00000494644 937 ntBASIC23.18■■□□□ 1.3
CDCA5Q96FF9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 AL512604.3-201ENST00000569583 964 ntBASIC23.18■■□□□ 1.3
CDCA5Q96FF9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.18■■□□□ 1.3
CDCA5Q96FF9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 AC008622.2-201ENST00000617006 1229 ntBASIC23.17■■□□□ 1.3
CDCA5Q96FF9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.17■■□□□ 1.3
CDCA5Q96FF9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 PRSS44-201ENST00000515154 1146 ntBASIC23.16■■□□□ 1.3
CDCA5Q96FF9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDCA5Q96FF9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 AC012313.10-201ENST00000623509 926 ntBASIC23.15■■□□□ 1.3
CDCA5Q96FF9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CDCA5Q96FF9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDCA5Q96FF9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.14■■□□□ 1.29
CDCA5Q96FF9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDCA5Q96FF9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDCA5Q96FF9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDCA5Q96FF9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms