Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC112907.3-201ENST00000577781 2400 ntBASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 TMEM179-206ENST00000616017 1645 ntBASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.76■□□□□ 0.75
ECHDC3Q96DC8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 AC012618.2-201ENST00000428058 849 ntBASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 AC093827.2-201ENST00000512654 315 ntBASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 Z99916.2-201ENST00000604037 246 ntBASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC3Q96DC8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 AC233702.5-201ENST00000584107 538 ntBASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ECHDC3Q96DC8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 RPS2P55-201ENST00000397318 883 ntBASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 AC107956.1-201ENST00000494359 873 ntBASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 C1QL1P1-201ENST00000568105 661 ntBASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 AL135905.2-201ENST00000584934 1404 ntBASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms