Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ZNF428Q96B54 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
ZNF428Q96B54 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC25.39■■□□□ 1.66
ZNF428Q96B54 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.39■■□□□ 1.66
ZNF428Q96B54 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
ZNF428Q96B54 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
ZNF428Q96B54 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC25.39■■□□□ 1.66
ZNF428Q96B54 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
ZNF428Q96B54 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC25.39■■□□□ 1.66
ZNF428Q96B54 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ZNF428Q96B54 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC25.39■■□□□ 1.66
ZNF428Q96B54 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
ZNF428Q96B54 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC25.39■■□□□ 1.66
ZNF428Q96B54 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ZNF428Q96B54 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
ZNF428Q96B54 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.65
ZNF428Q96B54 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ZNF428Q96B54 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
ZNF428Q96B54 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
ZNF428Q96B54 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
ZNF428Q96B54 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ZNF428Q96B54 MED17-221ENST00000639724 2317 ntTSL 5 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ZNF428Q96B54 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ZNF428Q96B54 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ZNF428Q96B54 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ZNF428Q96B54 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
ZNF428Q96B54 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ZNF428Q96B54 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
ZNF428Q96B54 MIR4497-201ENST00000583208 89 ntBASIC25.38■■□□□ 1.65
ZNF428Q96B54 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.38■■□□□ 1.65
ZNF428Q96B54 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC25.38■■□□□ 1.65
ZNF428Q96B54 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZNF428Q96B54 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZNF428Q96B54 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZNF428Q96B54 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZNF428Q96B54 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ZNF428Q96B54 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ZNF428Q96B54 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZNF428Q96B54 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ZNF428Q96B54 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZNF428Q96B54 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZNF428Q96B54 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC25.37■■□□□ 1.65
ZNF428Q96B54 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
ZNF428Q96B54 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ZNF428Q96B54 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ZNF428Q96B54 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ZNF428Q96B54 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC25.36■■□□□ 1.65
ZNF428Q96B54 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC25.36■■□□□ 1.65
ZNF428Q96B54 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC25.36■■□□□ 1.65
ZNF428Q96B54 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ZNF428Q96B54 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ZNF428Q96B54 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ZNF428Q96B54 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
ZNF428Q96B54 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ZNF428Q96B54 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ZNF428Q96B54 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC25.36■■□□□ 1.65
ZNF428Q96B54 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC25.35■■□□□ 1.65
ZNF428Q96B54 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
ZNF428Q96B54 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC25.35■■□□□ 1.65
ZNF428Q96B54 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ZNF428Q96B54 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC25.35■■□□□ 1.65
ZNF428Q96B54 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ZNF428Q96B54 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ZNF428Q96B54 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
ZNF428Q96B54 BID-204ENST00000399767 2129 ntTSL 2 BASIC25.35■■□□□ 1.65
ZNF428Q96B54 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.35■■□□□ 1.65
ZNF428Q96B54 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC25.35■■□□□ 1.65
ZNF428Q96B54 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.35■■□□□ 1.65
ZNF428Q96B54 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC25.35■■□□□ 1.65
ZNF428Q96B54 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
ZNF428Q96B54 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
ZNF428Q96B54 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
ZNF428Q96B54 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
ZNF428Q96B54 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms