Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.42■□□□□ 0.38
RFT1Q96AA3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFT1Q96AA3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.42■□□□□ 0.38
RFT1Q96AA3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.42■□□□□ 0.38
RFT1Q96AA3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.42■□□□□ 0.38
RFT1Q96AA3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.42■□□□□ 0.38
RFT1Q96AA3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFT1Q96AA3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFT1Q96AA3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFT1Q96AA3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFT1Q96AA3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFT1Q96AA3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFT1Q96AA3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFT1Q96AA3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.41■□□□□ 0.38
RFT1Q96AA3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFT1Q96AA3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFT1Q96AA3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.41■□□□□ 0.38
RFT1Q96AA3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.41■□□□□ 0.38
RFT1Q96AA3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.41■□□□□ 0.38
RFT1Q96AA3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFT1Q96AA3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.41■□□□□ 0.38
RFT1Q96AA3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.41■□□□□ 0.38
RFT1Q96AA3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.41■□□□□ 0.38
RFT1Q96AA3 KRT18P61-201ENST00000585825 1298 ntBASIC17.41■□□□□ 0.38
RFT1Q96AA3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFT1Q96AA3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.41■□□□□ 0.38
RFT1Q96AA3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFT1Q96AA3 AC019069.1-201ENST00000610008 1333 ntBASIC17.41■□□□□ 0.38
RFT1Q96AA3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RFT1Q96AA3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFT1Q96AA3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFT1Q96AA3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFT1Q96AA3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.41■□□□□ 0.38
RFT1Q96AA3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFT1Q96AA3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFT1Q96AA3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RFT1Q96AA3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFT1Q96AA3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFT1Q96AA3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.4■□□□□ 0.38
RFT1Q96AA3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.4■□□□□ 0.38
RFT1Q96AA3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.4■□□□□ 0.38
RFT1Q96AA3 UBE2DNL-204ENST00000602536 740 ntBASIC17.4■□□□□ 0.38
RFT1Q96AA3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFT1Q96AA3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFT1Q96AA3 AC007613.1-201ENST00000572811 2597 ntBASIC17.4■□□□□ 0.38
RFT1Q96AA3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.4■□□□□ 0.38
RFT1Q96AA3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RFT1Q96AA3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFT1Q96AA3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFT1Q96AA3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RFT1Q96AA3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFT1Q96AA3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFT1Q96AA3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFT1Q96AA3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.39■□□□□ 0.38
RFT1Q96AA3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RFT1Q96AA3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.39■□□□□ 0.37
RFT1Q96AA3 DPP3P2-201ENST00000416030 1696 ntBASIC17.39■□□□□ 0.37
RFT1Q96AA3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFT1Q96AA3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
RFT1Q96AA3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFT1Q96AA3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.39■□□□□ 0.37
RFT1Q96AA3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFT1Q96AA3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFT1Q96AA3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
RFT1Q96AA3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.39■□□□□ 0.37
RFT1Q96AA3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RFT1Q96AA3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RFT1Q96AA3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RFT1Q96AA3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RFT1Q96AA3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFT1Q96AA3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFT1Q96AA3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFT1Q96AA3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFT1Q96AA3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFT1Q96AA3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFT1Q96AA3 KRT19P1-201ENST00000405746 1186 ntBASIC17.38■□□□□ 0.37
RFT1Q96AA3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFT1Q96AA3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFT1Q96AA3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFT1Q96AA3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFT1Q96AA3 AC243732.1-201ENST00000612648 864 ntBASIC17.38■□□□□ 0.37
RFT1Q96AA3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFT1Q96AA3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFT1Q96AA3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFT1Q96AA3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 AL691432.2-201ENST00000607222 2038 ntBASIC17.38■□□□□ 0.37
RFT1Q96AA3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RFT1Q96AA3 AL138781.2-201ENST00000617896 1843 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms