Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S1Q92572 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S1Q92572 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
AP3S1Q92572 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.37■□□□□ 0.37
AP3S1Q92572 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.37■□□□□ 0.37
AP3S1Q92572 KRT16P3-201ENST00000439127 1283 ntBASIC17.37■□□□□ 0.37
AP3S1Q92572 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.37■□□□□ 0.37
AP3S1Q92572 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
AP3S1Q92572 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
AP3S1Q92572 LTB4R2-202ENST00000528054 3092 ntBASIC17.37■□□□□ 0.37
AP3S1Q92572 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S1Q92572 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S1Q92572 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S1Q92572 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
AP3S1Q92572 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
AP3S1Q92572 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S1Q92572 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
AP3S1Q92572 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S1Q92572 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
AP3S1Q92572 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S1Q92572 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S1Q92572 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S1Q92572 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S1Q92572 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
AP3S1Q92572 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP3S1Q92572 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.36■□□□□ 0.37
AP3S1Q92572 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3S1Q92572 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3S1Q92572 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S1Q92572 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S1Q92572 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S1Q92572 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3S1Q92572 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S1Q92572 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S1Q92572 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP3S1Q92572 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.36■□□□□ 0.37
AP3S1Q92572 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S1Q92572 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP3S1Q92572 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S1Q92572 AC009113.1-201ENST00000570267 2443 ntBASIC17.36■□□□□ 0.37
AP3S1Q92572 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S1Q92572 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3S1Q92572 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3S1Q92572 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S1Q92572 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.35■□□□□ 0.37
AP3S1Q92572 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S1Q92572 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S1Q92572 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
AP3S1Q92572 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S1Q92572 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.35■□□□□ 0.37
AP3S1Q92572 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S1Q92572 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.35■□□□□ 0.37
AP3S1Q92572 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S1Q92572 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.35■□□□□ 0.37
AP3S1Q92572 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S1Q92572 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.35■□□□□ 0.37
AP3S1Q92572 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
AP3S1Q92572 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S1Q92572 KRT16P2-201ENST00000414673 1423 ntBASIC17.35■□□□□ 0.37
AP3S1Q92572 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S1Q92572 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
AP3S1Q92572 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S1Q92572 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3S1Q92572 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S1Q92572 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S1Q92572 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3S1Q92572 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S1Q92572 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S1Q92572 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3S1Q92572 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S1Q92572 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
AP3S1Q92572 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S1Q92572 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S1Q92572 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S1Q92572 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3S1Q92572 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.34■□□□□ 0.37
AP3S1Q92572 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S1Q92572 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S1Q92572 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3S1Q92572 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3S1Q92572 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S1Q92572 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3S1Q92572 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3S1Q92572 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3S1Q92572 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3S1Q92572 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3S1Q92572 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3S1Q92572 AC104581.1-202ENST00000635932 2618 ntBASIC17.34■□□□□ 0.37
AP3S1Q92572 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
AP3S1Q92572 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
AP3S1Q92572 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S1Q92572 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3S1Q92572 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S1Q92572 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
AP3S1Q92572 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3S1Q92572 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3S1Q92572 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3S1Q92572 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3S1Q92572 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.33■□□□□ 0.37
AP3S1Q92572 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms