Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC25.93■■□□□ 1.74
RAPGEF4Q8WZA2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC25.93■■□□□ 1.74
RAPGEF4Q8WZA2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RAPGEF4Q8WZA2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
RAPGEF4Q8WZA2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 AC004951.3-201ENST00000418645 1148 ntBASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 AC008040.2-201ENST00000461049 708 ntBASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAPGEF4Q8WZA2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.91■■□□□ 1.74
RAPGEF4Q8WZA2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 BX664615.1-201ENST00000443558 458 ntBASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.9■■□□□ 1.74
RAPGEF4Q8WZA2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RAPGEF4Q8WZA2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.89■■□□□ 1.74
RAPGEF4Q8WZA2 AC026310.3-201ENST00000625186 2373 ntBASIC25.89■■□□□ 1.74
RAPGEF4Q8WZA2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RAPGEF4Q8WZA2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC25.89■■□□□ 1.74
RAPGEF4Q8WZA2 HIST1H2APS4-201ENST00000362070 348 ntBASIC25.89■■□□□ 1.74
RAPGEF4Q8WZA2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
RAPGEF4Q8WZA2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC25.89■■□□□ 1.74
RAPGEF4Q8WZA2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC25.89■■□□□ 1.74
RAPGEF4Q8WZA2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RAPGEF4Q8WZA2 MFAP1P1-201ENST00000442257 1255 ntBASIC25.89■■□□□ 1.74
RAPGEF4Q8WZA2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.89■■□□□ 1.74
RAPGEF4Q8WZA2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC25.89■■□□□ 1.74
RAPGEF4Q8WZA2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC25.89■■□□□ 1.73
RAPGEF4Q8WZA2 SMG8-203ENST00000578922 2178 ntBASIC25.89■■□□□ 1.73
RAPGEF4Q8WZA2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 HMGA1P5-201ENST00000412453 271 ntBASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 AK4P3-201ENST00000418260 669 ntBASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC25.88■■□□□ 1.73
RAPGEF4Q8WZA2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 AC096733.2-201ENST00000609937 1394 ntBASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 FAM207BP-201ENST00000447172 505 ntBASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC25.87■■□□□ 1.73
RAPGEF4Q8WZA2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms