Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF139Q8WU17 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF139Q8WU17 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF139Q8WU17 KRASP1-201ENST00000407852 552 ntBASIC20.71■□□□□ 0.91
RNF139Q8WU17 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
RNF139Q8WU17 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF139Q8WU17 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF139Q8WU17 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.71■□□□□ 0.91
RNF139Q8WU17 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF139Q8WU17 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF139Q8WU17 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF139Q8WU17 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RNF139Q8WU17 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF139Q8WU17 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF139Q8WU17 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF139Q8WU17 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF139Q8WU17 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF139Q8WU17 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF139Q8WU17 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF139Q8WU17 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF139Q8WU17 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF139Q8WU17 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF139Q8WU17 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.7■□□□□ 0.91
RNF139Q8WU17 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RNF139Q8WU17 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RNF139Q8WU17 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RNF139Q8WU17 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF139Q8WU17 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF139Q8WU17 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF139Q8WU17 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF139Q8WU17 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF139Q8WU17 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF139Q8WU17 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF139Q8WU17 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF139Q8WU17 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF139Q8WU17 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF139Q8WU17 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RNF139Q8WU17 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF139Q8WU17 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF139Q8WU17 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF139Q8WU17 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF139Q8WU17 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF139Q8WU17 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF139Q8WU17 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF139Q8WU17 PHGDH-210ENST00000641115 1638 ntBASIC20.7■□□□□ 0.9
RNF139Q8WU17 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF139Q8WU17 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF139Q8WU17 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF139Q8WU17 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF139Q8WU17 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RNF139Q8WU17 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF139Q8WU17 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF139Q8WU17 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF139Q8WU17 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF139Q8WU17 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RNF139Q8WU17 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF139Q8WU17 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF139Q8WU17 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF139Q8WU17 AC124016.1-201ENST00000609552 612 ntBASIC20.69■□□□□ 0.9
RNF139Q8WU17 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF139Q8WU17 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF139Q8WU17 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF139Q8WU17 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF139Q8WU17 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
RNF139Q8WU17 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF139Q8WU17 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF139Q8WU17 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF139Q8WU17 AC116351.2-201ENST00000606540 1585 ntBASIC20.68■□□□□ 0.9
RNF139Q8WU17 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF139Q8WU17 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF139Q8WU17 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF139Q8WU17 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF139Q8WU17 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF139Q8WU17 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RNF139Q8WU17 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RNF139Q8WU17 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.68■□□□□ 0.9
RNF139Q8WU17 UBE2SP1-201ENST00000450587 669 ntBASIC20.68■□□□□ 0.9
RNF139Q8WU17 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF139Q8WU17 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.68■□□□□ 0.9
RNF139Q8WU17 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RNF139Q8WU17 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF139Q8WU17 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF139Q8WU17 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF139Q8WU17 AL691432.2-201ENST00000607222 2038 ntBASIC20.68■□□□□ 0.9
RNF139Q8WU17 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF139Q8WU17 AC018553.1-201ENST00000616682 1458 ntBASIC20.68■□□□□ 0.9
RNF139Q8WU17 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF139Q8WU17 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RNF139Q8WU17 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF139Q8WU17 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF139Q8WU17 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF139Q8WU17 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF139Q8WU17 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.67■□□□□ 0.9
RNF139Q8WU17 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF139Q8WU17 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF139Q8WU17 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF139Q8WU17 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.67■□□□□ 0.9
RNF139Q8WU17 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.67■□□□□ 0.9
RNF139Q8WU17 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.67■□□□□ 0.9
RNF139Q8WU17 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms