Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 AC104187.1-201ENST00000607510 612 ntBASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 AL356652.1-201ENST00000615962 565 ntBASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 AL136967.2-201ENST00000623968 743 ntBASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 AC087633.2-202ENST00000565166 1439 ntBASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
RAB3IL1Q8TBN0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 AP001271.2-201ENST00000624018 1556 ntBASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 AL138781.2-201ENST00000617896 1843 ntBASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
RAB3IL1Q8TBN0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IL1Q8TBN0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms