Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFWD2Q8NHY2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD2Q8NHY2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD2Q8NHY2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 RBM17P2-201ENST00000616397 1405 ntBASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 AC009113.1-201ENST00000570267 2443 ntBASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.41■□□□□ 0.7
RFWD2Q8NHY2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms