Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SPTSSBQ8NFR3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SPTSSBQ8NFR3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC10.84□□□□□ -0.67
SPTSSBQ8NFR3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SPTSSBQ8NFR3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SPTSSBQ8NFR3 AC093503.3-201ENST00000624917 2352 ntBASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 RP9P-202ENST00000450133 1212 ntBASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 LINC01960-201ENST00000563759 1884 ntBASIC10.83□□□□□ -0.68
SPTSSBQ8NFR3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 BID-204ENST00000399767 2129 ntTSL 2 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 GABARAPL3-202ENST00000624044 1851 ntBASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 ANKRD26P3-201ENST00000454044 2748 ntBASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 AC087741.3-201ENST00000624270 1347 ntBASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SPTSSBQ8NFR3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 AC097376.2-205ENST00000610159 5334 ntBASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SPTSSBQ8NFR3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms