Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.05■□□□□ 0.8
DNAAF3Q8N9W5 AC120498.9-201ENST00000339021 3867 ntBASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 AC116562.4-201ENST00000641316 2276 ntBASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 DUSP5P2-201ENST00000426873 1033 ntBASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNAAF3Q8N9W5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 AL390719.1-204ENST00000412397 1219 ntBASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 NCF1B-203ENST00000435988 1254 ntBASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 TREX1-205ENST00000625293 1783 ntBASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.03■□□□□ 0.8
DNAAF3Q8N9W5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 AC092118.2-201ENST00000613495 667 ntBASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNAAF3Q8N9W5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms