Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.24■□□□□ 0.67
CPSF7Q8N684 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.24■□□□□ 0.67
CPSF7Q8N684 AC013268.1-206ENST00000638368 961 ntBASIC19.24■□□□□ 0.67
CPSF7Q8N684 AC112229.1-201ENST00000639295 961 ntBASIC19.24■□□□□ 0.67
CPSF7Q8N684 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPSF7Q8N684 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.24■□□□□ 0.67
CPSF7Q8N684 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPSF7Q8N684 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.24■□□□□ 0.67
CPSF7Q8N684 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.24■□□□□ 0.67
CPSF7Q8N684 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPSF7Q8N684 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.24■□□□□ 0.67
CPSF7Q8N684 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CPSF7Q8N684 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPSF7Q8N684 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPSF7Q8N684 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPSF7Q8N684 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPSF7Q8N684 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPSF7Q8N684 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPSF7Q8N684 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPSF7Q8N684 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPSF7Q8N684 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPSF7Q8N684 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPSF7Q8N684 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 AL032819.2-201ENST00000624543 2162 ntBASIC19.23■□□□□ 0.67
CPSF7Q8N684 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPSF7Q8N684 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CPSF7Q8N684 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPSF7Q8N684 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPSF7Q8N684 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPSF7Q8N684 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CPSF7Q8N684 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.22■□□□□ 0.67
CPSF7Q8N684 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPSF7Q8N684 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.22■□□□□ 0.67
CPSF7Q8N684 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPSF7Q8N684 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.22■□□□□ 0.67
CPSF7Q8N684 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPSF7Q8N684 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPSF7Q8N684 SLC29A4P1-201ENST00000398760 971 ntBASIC19.22■□□□□ 0.67
CPSF7Q8N684 AF201337.1-201ENST00000520239 748 ntBASIC19.22■□□□□ 0.67
CPSF7Q8N684 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CPSF7Q8N684 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPSF7Q8N684 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPSF7Q8N684 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPSF7Q8N684 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CPSF7Q8N684 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.22■□□□□ 0.67
CPSF7Q8N684 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPSF7Q8N684 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
CPSF7Q8N684 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CPSF7Q8N684 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.21■□□□□ 0.67
CPSF7Q8N684 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.21■□□□□ 0.67
CPSF7Q8N684 AL138781.1-201ENST00000566567 1274 ntBASIC19.21■□□□□ 0.67
CPSF7Q8N684 AC105036.2-201ENST00000569468 176 ntBASIC19.21■□□□□ 0.67
CPSF7Q8N684 AC142086.2-201ENST00000569753 217 ntBASIC19.21■□□□□ 0.67
CPSF7Q8N684 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CPSF7Q8N684 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.21■□□□□ 0.67
CPSF7Q8N684 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CPSF7Q8N684 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPSF7Q8N684 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CPSF7Q8N684 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CPSF7Q8N684 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CPSF7Q8N684 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.21■□□□□ 0.67
CPSF7Q8N684 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CPSF7Q8N684 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.2■□□□□ 0.66
CPSF7Q8N684 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.2■□□□□ 0.66
CPSF7Q8N684 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms