Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf42Q8N5U0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 AC026366.1-201ENST00000488803 879 ntBASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 SOX15-203ENST00000570788 1093 ntBASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 AC120498.8-201ENST00000614275 531 ntBASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf42Q8N5U0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 ESRRAP1-201ENST00000400596 1257 ntBASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 AP003097.1-201ENST00000530657 1135 ntBASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 AC008687.6-201ENST00000596318 630 ntBASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
C11orf42Q8N5U0 HCG11-201ENST00000411553 5696 ntBASIC16.36■□□□□ 0.21
C11orf42Q8N5U0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf42Q8N5U0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf42Q8N5U0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf42Q8N5U0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf42Q8N5U0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C11orf42Q8N5U0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms