Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.55■□□□□ 0.88
SCML4Q8N228 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SCML4Q8N228 C1QL1P1-201ENST00000568105 661 ntBASIC20.55■□□□□ 0.88
SCML4Q8N228 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.55■□□□□ 0.88
SCML4Q8N228 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SCML4Q8N228 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.55■□□□□ 0.88
SCML4Q8N228 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SCML4Q8N228 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCML4Q8N228 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SCML4Q8N228 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCML4Q8N228 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCML4Q8N228 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCML4Q8N228 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCML4Q8N228 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.55■□□□□ 0.88
SCML4Q8N228 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.55■□□□□ 0.88
SCML4Q8N228 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.55■□□□□ 0.88
SCML4Q8N228 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCML4Q8N228 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCML4Q8N228 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.54■□□□□ 0.88
SCML4Q8N228 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCML4Q8N228 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCML4Q8N228 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.54■□□□□ 0.88
SCML4Q8N228 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCML4Q8N228 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCML4Q8N228 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCML4Q8N228 AL353807.1-201ENST00000427475 662 ntBASIC20.54■□□□□ 0.88
SCML4Q8N228 AC012618.2-201ENST00000428058 849 ntBASIC20.54■□□□□ 0.88
SCML4Q8N228 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCML4Q8N228 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCML4Q8N228 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.54■□□□□ 0.88
SCML4Q8N228 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCML4Q8N228 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.54■□□□□ 0.88
SCML4Q8N228 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.54■□□□□ 0.88
SCML4Q8N228 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.54■□□□□ 0.88
SCML4Q8N228 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCML4Q8N228 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.54■□□□□ 0.88
SCML4Q8N228 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCML4Q8N228 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
SCML4Q8N228 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCML4Q8N228 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.53■□□□□ 0.88
SCML4Q8N228 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCML4Q8N228 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCML4Q8N228 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SCML4Q8N228 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.53■□□□□ 0.88
SCML4Q8N228 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.53■□□□□ 0.88
SCML4Q8N228 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.53■□□□□ 0.88
SCML4Q8N228 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.53■□□□□ 0.88
SCML4Q8N228 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCML4Q8N228 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.53■□□□□ 0.88
SCML4Q8N228 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCML4Q8N228 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCML4Q8N228 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.53■□□□□ 0.88
SCML4Q8N228 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCML4Q8N228 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SCML4Q8N228 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.53■□□□□ 0.88
SCML4Q8N228 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.52■□□□□ 0.88
SCML4Q8N228 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.52■□□□□ 0.88
SCML4Q8N228 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCML4Q8N228 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCML4Q8N228 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCML4Q8N228 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SCML4Q8N228 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCML4Q8N228 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.52■□□□□ 0.88
SCML4Q8N228 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCML4Q8N228 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCML4Q8N228 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCML4Q8N228 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.52■□□□□ 0.88
SCML4Q8N228 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.52■□□□□ 0.88
SCML4Q8N228 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCML4Q8N228 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.52■□□□□ 0.88
SCML4Q8N228 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.52■□□□□ 0.88
SCML4Q8N228 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.52■□□□□ 0.88
SCML4Q8N228 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCML4Q8N228 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SCML4Q8N228 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
SCML4Q8N228 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SCML4Q8N228 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
SCML4Q8N228 KRT8P8-201ENST00000434750 1448 ntBASIC20.52■□□□□ 0.87
SCML4Q8N228 HTR7P1-201ENST00000538670 1336 ntBASIC20.52■□□□□ 0.87
SCML4Q8N228 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SCML4Q8N228 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.51■□□□□ 0.87
SCML4Q8N228 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCML4Q8N228 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCML4Q8N228 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.51■□□□□ 0.87
SCML4Q8N228 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.51■□□□□ 0.87
SCML4Q8N228 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCML4Q8N228 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCML4Q8N228 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCML4Q8N228 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.51■□□□□ 0.87
SCML4Q8N228 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCML4Q8N228 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.51■□□□□ 0.87
SCML4Q8N228 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SCML4Q8N228 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.51■□□□□ 0.87
SCML4Q8N228 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCML4Q8N228 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCML4Q8N228 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCML4Q8N228 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
SCML4Q8N228 AC008550.1-201ENST00000511500 884 ntBASIC20.51■□□□□ 0.87
SCML4Q8N228 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCML4Q8N228 AC233702.5-201ENST00000584107 538 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms