Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 KRT18P68-201ENST00000392293 1000 ntBASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 RARRES2P4-201ENST00000514074 484 ntBASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LINC01561Q8N1V8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
LINC01561Q8N1V8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LINC01561Q8N1V8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC01561Q8N1V8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC01561Q8N1V8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
LINC01561Q8N1V8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC01561Q8N1V8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 AL138781.2-201ENST00000617896 1843 ntBASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 AC016405.3-201ENST00000607710 860 ntBASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms