Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC116Q8IYX3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
CCDC116Q8IYX3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CCDC116Q8IYX3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC116Q8IYX3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC116Q8IYX3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC116Q8IYX3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.58■□□□□ 0.57
CCDC116Q8IYX3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 AC018553.1-201ENST00000616682 1458 ntBASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC116Q8IYX3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 AC124283.5-201ENST00000624661 1809 ntBASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC116Q8IYX3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC116Q8IYX3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 RPS2P52-201ENST00000469610 820 ntBASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 AC116351.2-201ENST00000606540 1585 ntBASIC18.55■□□□□ 0.56
CCDC116Q8IYX3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms