Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.56■□□□□ 0.72
NUDCD3Q8IVD9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 NEFHP1-201ENST00000412845 2629 ntBASIC19.55■□□□□ 0.72
NUDCD3Q8IVD9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUDCD3Q8IVD9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 KRT18P14-201ENST00000534205 1250 ntBASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 AL591742.1-201ENST00000604433 565 ntBASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 AL031963.3-201ENST00000606441 850 ntBASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUDCD3Q8IVD9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms