Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD3Q7Z3D4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 AL121829.2-201ENST00000620908 328 ntBASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 AC066615.1-201ENST00000640911 628 ntBASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD3Q7Z3D4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 AP001271.2-201ENST00000624018 1556 ntBASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.79■□□□□ 0.76
LYSMD3Q7Z3D4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 TFP1-202ENST00000475455 1573 ntBASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 PRORSD1P-201ENST00000295112 541 ntBASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 MTDHP1-201ENST00000605323 784 ntBASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LYSMD3Q7Z3D4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms